RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 DKK4Q9UBT3 224 aa9.85□□□□□ -0.83
BDNF-218ENST00000533246 TANC2Q9HCD6 1990 aa9.84□□□□□ -0.83
BDNF-218ENST00000533246 Q0VG73 95 aa9.84□□□□□ -0.83
BDNF-218ENST00000533246 NUP37Q8NFH4 326 aa9.84□□□□□ -0.83
BDNF-218ENST00000533246 LOXP28300 417 aaPredicted RBP9.84□□□□□ -0.83
BDNF-218ENST00000533246 CEACAM4O75871 244 aa9.84□□□□□ -0.83
BDNF-218ENST00000533246 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
BDNF-218ENST00000533246 PYGO2Q9BRQ0 406 aa9.84□□□□□ -0.83
BDNF-218ENST00000533246 ARHGAP32A7KAX9 2087 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 POLQO75417 2590 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 GGTLC3B5MD39 225 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 F8W1H4 67 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 CACNG7P62955 275 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 H3BUX3 64 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 SNRPD3P62318 126 aaKnown RBP9.83□□□□□ -0.84
BDNF-218ENST00000533246 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
BDNF-218ENST00000533246 SYS1-DBNDD2H3BUS1 97 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 TMEM155Q4W5P6 130 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 G3V318 75 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 SMKR1H3BMG3 65 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 CRXO43186 299 aaPredicted RBP9.82□□□□□ -0.84
BDNF-218ENST00000533246 NDUFA3O95167 84 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 RCHY1Q96PM5 261 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 FAM110AQ9BQ89 295 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 ITLN2Q8WWU7 325 aaPredicted RBP9.82□□□□□ -0.84
BDNF-218ENST00000533246 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
BDNF-218ENST00000533246 K7ENP7 123 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 LEPP41159 167 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 TRGV9Q99603 122 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 SAA4P35542 130 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 ASIPP42127 132 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 C20orf78Q9BR46 151 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 DSCAML1Q8TD84 2053 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 ZNF462Q96JM2 2506 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 CD7P09564 240 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 EFNA4P52798 201 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 SSBP2P81877 361 aaPredicted RBP9.81□□□□□ -0.84
BDNF-218ENST00000533246 PAX8Q06710 450 aa9.81□□□□□ -0.84
BDNF-218ENST00000533246 D6R8Y8 96 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 LCNL1Q6ZST4 164 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 SCGB3A1Q96QR1 104 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 BEX4Q9NWD9 120 aaPredicted RBP9.8□□□□□ -0.84
BDNF-218ENST00000533246 PIP4P1Q86T03 277 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 SPAG8Q99932 426 aaPredicted RBP9.8□□□□□ -0.84
BDNF-218ENST00000533246 SPANXA1Q9NS26 97 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 A8MWV9 139 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 CRYGCP07315 174 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 ZNF688P0C7X2 276 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 Q6ZPA2 131 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 JMJD8Q96S16 334 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
BDNF-218ENST00000533246 FCN3O75636 299 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 GATA3P23771 443 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 GATA4P43694 442 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 YPEL3P61236 119 aaPredicted RBP9.79□□□□□ -0.84
BDNF-218ENST00000533246 RUSC1-AS1Q66K80 236 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 IGFL3Q6UXB1 125 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 AMN1Q8IY45 258 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 MT-ATP8P03928 68 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 SRSF2Q01130 221 aaKnown RBP9.79□□□□□ -0.84
BDNF-218ENST00000533246 CTSZQ9UBR2 303 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 KLF12Q9Y4X4 402 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 ERCC8Q13216 396 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 OR9G4Q8NGQ1 327 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 SPRY4Q9C004 299 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 SMPXQ9UHP9 88 aa9.79□□□□□ -0.84
BDNF-218ENST00000533246 RAX2Q96IS3 184 aa9.78□□□□□ -0.84
BDNF-218ENST00000533246 Q6AWC8 147 aa9.78□□□□□ -0.84
BDNF-218ENST00000533246 SEM1Q6ZVN7 128 aa9.78□□□□□ -0.84
BDNF-218ENST00000533246 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
BDNF-218ENST00000533246 EDA2RQ9HAV5 297 aa9.78□□□□□ -0.84
BDNF-218ENST00000533246 XIRP2A4UGR9 3374 aa9.77□□□□□ -0.84
BDNF-218ENST00000533246 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 RRN3P1Q2M238 152 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 NPIPB6E9PJ23 425 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 K7ERJ3 54 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 PSMG4Q5JS54 123 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 UTF1Q5T230 341 aa9.77□□□□□ -0.85
BDNF-218ENST00000533246 LTBP2Q14767 1821 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 TMEM213A2RRL7 107 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 NPFFO15130 113 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 CRIP3Q6Q6R5 217 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 FNDC10F2Z333 226 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 HBDP02042 147 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 VWC2Q2TAL6 325 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 SLC50A1Q9BRV3 221 aa9.76□□□□□ -0.85
BDNF-218ENST00000533246 CFAP54Q96N23 3096 aa9.75□□□□□ -0.85
BDNF-218ENST00000533246 PTH2Q96A98 100 aa9.75□□□□□ -0.85
BDNF-218ENST00000533246 C17orf77Q96MU5 243 aa9.75□□□□□ -0.85
BDNF-218ENST00000533246 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms