RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 SUN5Q8TC36 379 aa9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 C11orf68Q9H3H3 251 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 YTHDF2Q9Y5A9 579 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-212ENST00000533058 A0A1W2PRE2 83 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 M0R2Z0 102 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 TSPOP30536 169 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 PPT1P50897 306 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 GNG5P63218 68 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 SPINK13Q1W4C9 94 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 C5orf17Q8NAS9 161 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 RYR2Q92736 4967 aa9.41□□□□□ -0.9
TRAPPC4-212ENST00000533058 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 GGTLC3B5MD39 225 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 J3KRW8 73 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 K7EQM0 130 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 PAGE4O60829 102 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 AMBPP02760 352 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 LEPP41159 167 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 BLOC1S1P78537 153 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 VGLL1Q99990 258 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
TRAPPC4-212ENST00000533058 LYSTQ99698 3801 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 FAM74A7A6NL05 159 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 INSP01308 110 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 CT45A10P0DMU9 189 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 TMEM208Q9BTX3 173 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 EPDR1Q9UM22 224 aa9.39□□□□□ -0.91
TRAPPC4-212ENST00000533058 TRAV12-2A0A075B6T6 113 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 A8MTW9 85 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 F6UZH7 168 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 IFNA1P01562 189 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 MIFP14174 115 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 CDKN1BP46527 198 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 ZNF138P52744 262 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 CCL20P78556 96 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 ARL6IP6Q8N6S5 226 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 Q8TAT8 98 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 MANBALQ9NQG1 85 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
TRAPPC4-212ENST00000533058 SACSQ9NZJ4 4579 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 SERTM2A0A1B0GWG4 89 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 CXorf65A6NEN9 183 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 TCRAP04437 139 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 ATP5G3P48201 142 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 CYB561D1Q8N8Q1 229 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 Q8NAQ8 132 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 SGK494Q96LW2 274 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 ATG101Q9BSB4 218 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 ARL2-SNX15V9GYD0 113 aa9.37□□□□□ -0.91
TRAPPC4-212ENST00000533058 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 C11orf94C9JXX5 98 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 PEX7O00628 323 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 GPX1P07203 203 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 RNASE4P34096 147 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 NDFIP1Q9BT67 221 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 ZNF492Q9P255 531 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 X6R8D5 127 aa9.36□□□□□ -0.91
TRAPPC4-212ENST00000533058 AKR1C3P42330 323 aa9.35□□□□□ -0.91
TRAPPC4-212ENST00000533058 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
TRAPPC4-212ENST00000533058 C11orf45Q8TAV5 145 aa9.35□□□□□ -0.91
TRAPPC4-212ENST00000533058 HIST1H2BAQ96A08 127 aa9.35□□□□□ -0.91
TRAPPC4-212ENST00000533058 LINC01587Q99440 93 aa9.35□□□□□ -0.91
TRAPPC4-212ENST00000533058 KLK5Q9Y337 293 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-212ENST00000533058 TRAV12-3A0A0B4J271 114 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 TRAV34A0A0B4J273 112 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 HTN1P15515 57 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 UBE2G1P62253 170 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 PMS2P11Q13670 270 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 KIR3DS1Q14943 382 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 GFI1BQ5VTD9 330 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 PCNPQ8WW12 178 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 NEU1Q99519 415 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 TCEAL7Q9BRU2 100 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 NIPSNAP3BQ9BS92 247 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 PSG8Q9UQ74 426 aa9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 PLECQ15149 4684 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-212ENST00000533058 IGHV4-28A0A0C4DH34 117 aa9.33□□□□□ -0.92
TRAPPC4-212ENST00000533058 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
TRAPPC4-212ENST00000533058 C7orf71A4D174 169 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms