RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SRD5A3Q9H8P0 318 aa9.23□□□□□ -0.93
COPB1-208ENST00000532088 KIR2DL5BA0A0G2JN68 375 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 KIR2DL5BA0A0G2JPC4 375 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 TRBV7-9A0A0J9YWB2 115 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 LOC102723971A0A1B0GUV8 181 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 ZNF705FA8MVS1 300 aaPredicted RBP9.22□□□□□ -0.93
COPB1-208ENST00000532088 C11orf94C9JXX5 98 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 K7EIL1 84 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 PDE6DO43924 150 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 TCRAP04437 139 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 MEF2BQ02080 365 aaPredicted RBP9.22□□□□□ -0.93
COPB1-208ENST00000532088 ZNF506Q5JVG8 444 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 MORN3Q6PF18 240 aaPredicted RBP9.22□□□□□ -0.93
COPB1-208ENST00000532088 LINC00322Q6ZN03 302 aaPredicted RBP9.22□□□□□ -0.93
COPB1-208ENST00000532088 KIR2DL5AQ8N109 375 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 KIR2DL5BQ8NHK3 375 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 SMDT1Q9H4I9 107 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 LENEPQ9Y5L5 61 aa9.22□□□□□ -0.93
COPB1-208ENST00000532088 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.94
COPB1-208ENST00000532088 RBFOX3A6NFN3 312 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 KNCNA6PVL3 124 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 ATP5G3P48201 142 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 CNN1P51911 297 aaKnown RBP9.21□□□□□ -0.94
COPB1-208ENST00000532088 NUTF2P61970 127 aaKnown RBP9.21□□□□□ -0.94
COPB1-208ENST00000532088 ZNF124Q15973 351 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 GDF5OSQ5U4N7 250 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 C11orf52Q96A22 123 aa9.21□□□□□ -0.94
COPB1-208ENST00000532088 TRBV6-1A0A0K0K1D8 114 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 F6UB75 175 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 PEX7O00628 323 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 UBE2CO00762 179 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 AMBPP02760 352 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 S100A9P06702 114 aaKnown RBP9.2□□□□□ -0.94
COPB1-208ENST00000532088 APOC4P55056 127 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 HIST1H1AQ02539 215 aaPredicted RBP9.2□□□□□ -0.94
COPB1-208ENST00000532088 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 MED9Q9NWA0 146 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 KLF12Q9Y4X4 402 aa9.2□□□□□ -0.94
COPB1-208ENST00000532088 IGKV2-40A0A087WW87 121 aaPredicted RBP9.19□□□□□ -0.94
COPB1-208ENST00000532088 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
COPB1-208ENST00000532088 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
COPB1-208ENST00000532088 IGKV2D-40P01614 121 aaPredicted RBP9.19□□□□□ -0.94
COPB1-208ENST00000532088 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
COPB1-208ENST00000532088 GNG5P63218 68 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 HAGHQ16775 308 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 AMTNQ6UX39 209 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 GOLT1AQ6ZVE7 132 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 AGPAT4-IT1Q9H0P7 198 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
COPB1-208ENST00000532088 RAB19A4D1S5 217 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 TMEM250H0YL14 139 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 CRISP2P16562 243 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 TSPOP30536 169 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 LEPP41159 167 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 ZNF138P52744 262 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 DEFB1P60022 68 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 OR4B1Q8NGF8 309 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 C2CD4CQ8TF44 421 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 PCNPQ8WW12 178 aaKnown RBP9.18□□□□□ -0.94
COPB1-208ENST00000532088 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 VGLL1Q99990 258 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 C1QTNF4Q9BXJ3 329 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 CSTL1Q9H114 145 aa9.18□□□□□ -0.94
COPB1-208ENST00000532088 IGLV2-11P01706 119 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 PRB2P02812 416 aaPredicted RBP9.17□□□□□ -0.94
COPB1-208ENST00000532088 FRMD6-AS1P0C7T7 363 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 CT45A10P0DMU9 189 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 AKR1C3P42330 323 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 LINC00310P59036 64 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 TAS2R60P59551 318 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 PEA15Q15121 130 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 TMEM183BQ1AE95 376 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 MRAPQ8TCY5 172 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 RARRES2Q99969 163 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 EIF5A2Q9GZV4 153 aaKnown RBP9.17□□□□□ -0.94
COPB1-208ENST00000532088 RPH3ALQ9UNE2 315 aa9.17□□□□□ -0.94
COPB1-208ENST00000532088 ZNF705DP0CH99 300 aaPredicted RBP9.16□□□□□ -0.94
COPB1-208ENST00000532088 ZNF705BP0CI00 300 aaPredicted RBP9.16□□□□□ -0.94
COPB1-208ENST00000532088 CDKN1BP46527 198 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 DEFA6Q01524 100 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
COPB1-208ENST00000532088 ERCC8Q13216 396 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 SAPCD1Q5SSQ6 148 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 C20orf144Q9BQM9 153 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 NDFIP1Q9BT67 221 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 PSG8Q9UQ74 426 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 ZFP30Q9Y2G7 519 aa9.16□□□□□ -0.94
COPB1-208ENST00000532088 NBEAL1Q6ZS30 2694 aa9.15□□□□□ -0.94
COPB1-208ENST00000532088 LINC00862A6NCI5 91 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms