RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 BCAP31P51572 246 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 CAV2P51636 162 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 ERVFC1-1P60608 527 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 VAMP2P63027 116 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 NHLH2Q02577 135 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 RAB31Q13636 194 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 C10orf113Q5VZT2 155 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 Q6ZSN1 163 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 SLC50A1Q9BRV3 221 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 GGACTQ9BVM4 153 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 ZNF331Q9NQX6 463 aaPredicted RBP6.1□□□□□ -1.43
USF1-210ENST00000531842 FAM30AQ9NZY2 134 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 WDR83OSQ9Y284 106 aa6.1□□□□□ -1.43
USF1-210ENST00000531842 TRAV5A0A0B4J249 113 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 TRAV12-3A0A0B4J271 114 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 NXPH4O95158 308 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 LEPP41159 167 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 SULT1A1P50225 295 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 S100A10P60903 97 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 GFI1BQ5VTD9 330 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 MIC13Q5XKP0 118 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 Q6ZRG5 221 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 Q6ZTI0 123 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 C20orf144Q9BQM9 153 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 NMES1Q9C002 83 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 DNAJC4Q9NNZ3 241 aa6.09□□□□□ -1.43
USF1-210ENST00000531842 TRGV2A0A075B6R0 118 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 H3BQ15 152 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 SLC17A3O00476 420 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 SIVA1O15304 175 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 PRAF2O60831 178 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 IFNA5P01569 189 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 GCSHP23434 173 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 CAMLGP49069 296 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 OPCMLQ14982 345 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 GCSAMLQ5JQS6 135 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 CHAC2Q8WUX2 184 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 PXMP4Q9Y6I8 212 aa6.08□□□□□ -1.44
USF1-210ENST00000531842 FAT3Q8TDW7 4589 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 EREGO14944 169 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 IGHV3-53P01767 116 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 CT45A10P0DMU9 189 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 IGLC2P0DOY2 106 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 GUK1Q16774 197 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 LRRC37A5PQ49AS3 106 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 OR1L4Q8NGR5 311 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 PPP1R1CQ8WVI7 109 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 SAT2Q96F10 170 aaPredicted RBP6.07□□□□□ -1.44
USF1-210ENST00000531842 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 GPN1Q9HCN4 374 aaPredicted RBP6.07□□□□□ -1.44
USF1-210ENST00000531842 UQCC1Q9NVA1 299 aa6.07□□□□□ -1.44
USF1-210ENST00000531842 UBE2L5PA0A1B0GUS4 154 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 MPC2O95563 127 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 S100A11P31949 105 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 RPL29P47914 159 aaKnown RBP6.06□□□□□ -1.44
USF1-210ENST00000531842 Q5BKY6 102 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 CDPF1Q6NVV7 123 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 OR5C1Q8NGR4 320 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 THAP6Q8TBB0 222 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 PYGO2Q9BRQ0 406 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 WFDC1Q9HC57 220 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 SLC39A9Q9NUM3 307 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 TIMM9Q9Y5J7 89 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 ALG5Q9Y673 324 aa6.06□□□□□ -1.44
USF1-210ENST00000531842 TRGV1A0A0A0MS02 117 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 E5RGE8 158 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 NPIPB6E9PJ23 425 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 NDUFB4O95168 129 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 SLC25A5P05141 298 aaKnown RBP6.05□□□□□ -1.44
USF1-210ENST00000531842 PVALBP20472 110 aaPredicted RBP6.05□□□□□ -1.44
USF1-210ENST00000531842 FGF7P21781 194 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 RNASE4P34096 147 aaKnown RBP6.05□□□□□ -1.44
USF1-210ENST00000531842 BAXQ07812 192 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 DAZ2Q13117 558 aaKnown RBP6.05□□□□□ -1.44
USF1-210ENST00000531842 ERCC8Q13216 396 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 WFDC10BQ8IUB3 73 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 FAM167A-AS1Q96KT0 104 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 ODF3Q96PU9 254 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 PFDN5Q99471 154 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 NPCDR1Q9BY65 106 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 GSN-AS1Q9NRJ2 163 aa6.05□□□□□ -1.44
USF1-210ENST00000531842 C7orf71A4D174 169 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
USF1-210ENST00000531842 H3BNG1 76 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 GPX1P07203 203 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 DEFA1P59665 94 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 DEFA3P59666 94 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 ATP6V1FQ16864 119 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 Q6ZQT7 251 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 STX12Q86Y82 276 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 ZNF680Q8NEM1 530 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 BLNKQ8WV28 456 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 FUT9Q9Y231 359 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 KLF12Q9Y4X4 402 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 PKHD1L1Q86WI1 4243 aa6.04□□□□□ -1.44
USF1-210ENST00000531842 TRBV19A0A075B6N1 114 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 IGLV5-52A0A0A0MRZ9 124 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 M0R3E3 92 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms