RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 LEPP41159 167 aa13.49□□□□□ -0.25
UBXN1-211ENST00000531056 ERCC8Q13216 396 aa13.49□□□□□ -0.25
UBXN1-211ENST00000531056 ICAM4Q14773 271 aa13.49□□□□□ -0.25
UBXN1-211ENST00000531056 TMUB2Q71RG4 321 aa13.49□□□□□ -0.25
UBXN1-211ENST00000531056 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
UBXN1-211ENST00000531056 PHYHIPLQ96FC7 376 aa13.49□□□□□ -0.25
UBXN1-211ENST00000531056 LYRM9A8MSI8 78 aa13.48□□□□□ -0.25
UBXN1-211ENST00000531056 H7BYZ3 331 aa13.48□□□□□ -0.25
UBXN1-211ENST00000531056 OR7C2O60412 319 aa13.48□□□□□ -0.25
UBXN1-211ENST00000531056 KHDC3LQ587J8 217 aa13.48□□□□□ -0.25
UBXN1-211ENST00000531056 FAM19A4Q96LR4 140 aa13.48□□□□□ -0.25
UBXN1-211ENST00000531056 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
UBXN1-211ENST00000531056 DAD1P61803 113 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 EIF5AP63241 154 aaKnown RBP13.47□□□□□ -0.25
UBXN1-211ENST00000531056 SERF2P84101 59 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 ACOT6Q3I5F7 207 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-211ENST00000531056 LGALSLQ3ZCW2 172 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-211ENST00000531056 FAM122CQ6P4D5 195 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 OR2G3Q8NGZ4 309 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 RNASE8Q8TDE3 154 aaKnown RBP13.47□□□□□ -0.25
UBXN1-211ENST00000531056 C16orf74Q96GX8 76 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 ZNF471Q9BX82 626 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-211ENST00000531056 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
UBXN1-211ENST00000531056 VPS13DQ5THJ4 4388 aa13.46□□□□□ -0.25
UBXN1-211ENST00000531056 IGKV2-40A0A087WW87 121 aaPredicted RBP13.46□□□□□ -0.25
UBXN1-211ENST00000531056 J3KRW8 73 aa13.46□□□□□ -0.25
UBXN1-211ENST00000531056 IGKV2D-40P01614 121 aaPredicted RBP13.46□□□□□ -0.25
UBXN1-211ENST00000531056 M6PRP20645 277 aa13.46□□□□□ -0.25
UBXN1-211ENST00000531056 TAS2R45P59539 299 aa13.46□□□□□ -0.25
UBXN1-211ENST00000531056 UBE2L3P68036 154 aaKnown RBP13.46□□□□□ -0.25
UBXN1-211ENST00000531056 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
UBXN1-211ENST00000531056 LINC00477Q96M19 166 aa13.46□□□□□ -0.25
UBXN1-211ENST00000531056 KLLNB2CW77 178 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 EIF3GO75821 320 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBXN1-211ENST00000531056 MBP02144 154 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 HTN1P15515 57 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 RAB2AP61019 212 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 ZNF493Q6ZR52 646 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 LYPD1Q8N2G4 141 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 NDUFAF3Q9BU61 184 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 SH3BGRL3Q9H299 93 aa13.45□□□□□ -0.26
UBXN1-211ENST00000531056 TRAV12-3A0A0B4J271 114 aa13.44□□□□□ -0.26
UBXN1-211ENST00000531056 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
UBXN1-211ENST00000531056 FAM210BQ96KR6 192 aa13.44□□□□□ -0.26
UBXN1-211ENST00000531056 VGLL1Q99990 258 aa13.44□□□□□ -0.26
UBXN1-211ENST00000531056 Q9H3A6 140 aa13.44□□□□□ -0.26
UBXN1-211ENST00000531056 DNAH6Q9C0G6 4158 aa13.44□□□□□ -0.26
UBXN1-211ENST00000531056 A0A1W2PPV4 95 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 C7orf71A4D174 169 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 HTN3P15516 51 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 CRISP2P16562 243 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 RANP62826 216 aaKnown RBP13.43□□□□□ -0.26
UBXN1-211ENST00000531056 OR10G4Q8NGN3 311 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 OR10G9Q8NGN4 311 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 OR10G7Q8NGN6 311 aa13.43□□□□□ -0.26
UBXN1-211ENST00000531056 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
UBXN1-211ENST00000531056 TPT1P13693 172 aaKnown RBP13.42□□□□□ -0.26
UBXN1-211ENST00000531056 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
UBXN1-211ENST00000531056 PQLC2Q6ZP29 291 aa13.42□□□□□ -0.26
UBXN1-211ENST00000531056 C9orf62Q8N4C0 152 aa13.42□□□□□ -0.26
UBXN1-211ENST00000531056 ZNF492Q9P255 531 aa13.42□□□□□ -0.26
UBXN1-211ENST00000531056 ZNF324O75467 553 aaPredicted RBP13.41□□□□□ -0.26
UBXN1-211ENST00000531056 DEFB130BP0DP73 79 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 DEFB130AP0DP74 79 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 BTN1A1Q13410 526 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 AKR1C8PQ5T2L2 129 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 ZFAND2AQ8N6M9 145 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 STOML3Q8TAV4 291 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 PYGO2Q9BRQ0 406 aa13.41□□□□□ -0.26
UBXN1-211ENST00000531056 EPPK1P58107 5090 aaKnown RBP13.41□□□□□ -0.26
UBXN1-211ENST00000531056 RBAKDNA6NC62 111 aa13.4□□□□□ -0.26
UBXN1-211ENST00000531056 NMBP08949 121 aa13.4□□□□□ -0.26
UBXN1-211ENST00000531056 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
UBXN1-211ENST00000531056 CDC34P49427 236 aaPredicted RBP13.4□□□□□ -0.26
UBXN1-211ENST00000531056 PRR9Q5T870 116 aa13.4□□□□□ -0.26
UBXN1-211ENST00000531056 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
UBXN1-211ENST00000531056 LINC00467Q9BRT7 94 aa13.4□□□□□ -0.26
UBXN1-211ENST00000531056 NOP10Q9NPE3 64 aaKnown RBP13.4□□□□□ -0.26
UBXN1-211ENST00000531056 TRBV7-9A0A0J9YWB2 115 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 CSN1S1P47710 185 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 ZNF138P52744 262 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 SLC51BQ86UW2 128 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 LINC00612Q8N6U2 182 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 Q8TAT8 98 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 ACTR3CQ9C0K3 210 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-211ENST00000531056 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
UBXN1-211ENST00000531056 CBY3A6NI87 242 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 DIRC3C9JPN6 131 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 HMGB3O15347 200 aaKnown RBP13.38□□□□□ -0.27
UBXN1-211ENST00000531056 GPX1P07203 203 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 STAG3L2P0CL84 134 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 P0DMU3 169 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 FAM231AP0DMU4 169 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 FAM231CP0DMU5 169 aa13.38□□□□□ -0.27
UBXN1-211ENST00000531056 RNASE4P34096 147 aaKnown RBP13.38□□□□□ -0.27
UBXN1-211ENST00000531056 EIF5AL1Q6IS14 154 aaKnown RBP13.38□□□□□ -0.27
UBXN1-211ENST00000531056 ARL14EPLP0DKL9 152 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms