RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 TWIST1Q15672 202 aa14.23□□□□□ -0.13
RPL38-205ENST00000530646 VMA21Q3ZAQ7 101 aa14.22□□□□□ -0.13
RPL38-205ENST00000530646 MAP1LC3AQ9H492 121 aa14.22□□□□□ -0.13
RPL38-205ENST00000530646 SMG1Q96Q15 3661 aaKnown RBP14.21□□□□□ -0.13
RPL38-205ENST00000530646 RNF185Q96GF1 192 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 RELNP78509 3460 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 TRAV40A0A0B4J280 105 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 B5MCH6 92 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 GATA4P43694 442 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 GAGE5Q13069 117 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 GAGE6Q13070 117 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 HIST1H4GQ99525 98 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 TMEM160Q9NX00 188 aa14.21□□□□□ -0.13
RPL38-205ENST00000530646 IGF2RP11717 2491 aa14.2□□□□□ -0.14
RPL38-205ENST00000530646 HERV-K104P63124 156 aa14.2□□□□□ -0.14
RPL38-205ENST00000530646 C9orf106Q8NAJ2 232 aa14.2□□□□□ -0.14
RPL38-205ENST00000530646 ANAPC13Q9BS18 74 aa14.2□□□□□ -0.14
RPL38-205ENST00000530646 SHANK2-AS3Q9BTD1 123 aa14.2□□□□□ -0.14
RPL38-205ENST00000530646 SCNM1Q9BWG6 230 aa14.2□□□□□ -0.14
RPL38-205ENST00000530646 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 TRBV7-9A0A0J9YWB2 115 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 K7EM74 188 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 CFAP126Q5VTH2 177 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 LYPD1Q8N2G4 141 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 FAM169BQ8N8A8 192 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 MSRB1Q9NZV6 116 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 RPL27AP46776 148 aaKnown RBP14.19□□□□□ -0.14
RPL38-205ENST00000530646 MORN3Q6PF18 240 aaPredicted RBP14.19□□□□□ -0.14
RPL38-205ENST00000530646 LCNL1Q6ZST4 164 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 ATP6V0E2Q8NHE4 81 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 TMEM158Q8WZ71 300 aa14.19□□□□□ -0.14
RPL38-205ENST00000530646 MRPL35Q9NZE8 188 aaKnown RBP14.19□□□□□ -0.14
RPL38-205ENST00000530646 ATP5LO75964 103 aa14.18□□□□□ -0.14
RPL38-205ENST00000530646 RBP4P02753 201 aa14.18□□□□□ -0.14
RPL38-205ENST00000530646 EGR2P11161 476 aaPredicted RBP14.18□□□□□ -0.14
RPL38-205ENST00000530646 UFC1Q9Y3C8 167 aa14.18□□□□□ -0.14
RPL38-205ENST00000530646 LINC01548A6NM66 108 aa14.18□□□□□ -0.14
RPL38-205ENST00000530646 NHLRC4P0CG21 123 aaPredicted RBP14.18□□□□□ -0.14
RPL38-205ENST00000530646 ZNF575Q86XF7 245 aa14.18□□□□□ -0.14
RPL38-205ENST00000530646 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
RPL38-205ENST00000530646 IGHV3-72A0A0B4J1Y9 119 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 PRSS29PA6NIE9 313 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 H3BRN7 92 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 MRPS12O15235 138 aaKnown RBP14.17□□□□□ -0.14
RPL38-205ENST00000530646 TNFRSF6BO95407 300 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 IGKV1-17P01599 117 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 TMEM190Q8WZ59 177 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 RASL11BQ9BPW5 248 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 FAM110AQ9BQ89 295 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 ENSAO43768 121 aaKnown RBP14.17□□□□□ -0.14
RPL38-205ENST00000530646 BRI3O95415 125 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 TNFAIP6P98066 277 aaPredicted RBP14.17□□□□□ -0.14
RPL38-205ENST00000530646 CARD19Q96LW7 228 aa14.17□□□□□ -0.14
RPL38-205ENST00000530646 NXT2Q9NPJ8 142 aaKnown RBP14.17□□□□□ -0.14
RPL38-205ENST00000530646 FCN3O75636 299 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 IGLC6P0CF74 106 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 CNTFRP26992 372 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 TMEM200BQ69YZ2 307 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 Q6ZS92 163 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 CADP27708 2225 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 ADGRG4Q8IZF6 3080 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 FAM90A27PA6NNH2 459 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 IGHV1-46P01743 117 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 GATA1P15976 413 aaPredicted RBP14.16□□□□□ -0.14
RPL38-205ENST00000530646 PTH2Q96A98 100 aa14.16□□□□□ -0.14
RPL38-205ENST00000530646 INTS1Q8N201 2190 aaKnown RBP14.15□□□□□ -0.14
RPL38-205ENST00000530646 M0R1B8 84 aa14.15□□□□□ -0.14
RPL38-205ENST00000530646 LINC01559Q495D7 138 aa14.15□□□□□ -0.14
RPL38-205ENST00000530646 I3L2K1 104 aa14.15□□□□□ -0.14
RPL38-205ENST00000530646 SRSF8Q9BRL6 282 aaKnown RBP14.15□□□□□ -0.14
RPL38-205ENST00000530646 IGLV3-9A0A075B6K5 115 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 GLRXP35754 106 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 ZNF80P51504 273 aaPredicted RBP14.14□□□□□ -0.15
RPL38-205ENST00000530646 FOXC1Q12948 553 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 ABCA1O95477 2261 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 TEX22C9J3V5 150 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 TEX36Q5VZQ5 186 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 IGF2-ASQ6U949 168 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 IGFL2Q6UWQ7 119 aa14.14□□□□□ -0.15
RPL38-205ENST00000530646 RALYQ9UKM9 306 aaKnown RBP14.14□□□□□ -0.15
RPL38-205ENST00000530646 CEACAM4O75871 244 aa14.13□□□□□ -0.15
RPL38-205ENST00000530646 IGKV2-40A0A087WW87 121 aaPredicted RBP14.13□□□□□ -0.15
RPL38-205ENST00000530646 HOXA3O43365 443 aaPredicted RBP14.13□□□□□ -0.15
RPL38-205ENST00000530646 IGKV2D-40P01614 121 aaPredicted RBP14.13□□□□□ -0.15
RPL38-205ENST00000530646 CRYGBP07316 175 aa14.13□□□□□ -0.15
RPL38-205ENST00000530646 COX8CQ7Z4L0 72 aa14.13□□□□□ -0.15
RPL38-205ENST00000530646 IGLV2-18A0A075B6J9 118 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 LINC00311Q8N616 119 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 DLX4Q92988 240 aaPredicted RBP14.12□□□□□ -0.15
RPL38-205ENST00000530646 PSMG3-AS1Q96PY0 264 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 PRR25Q96S07 402 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 PROCRQ9UNN8 238 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 TLN1Q9Y490 2541 aaKnown RBP14.12□□□□□ -0.15
RPL38-205ENST00000530646 TRAV17A0A0B4J275 112 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 ZNF491Q8N8L2 437 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 Q8N8P6 123 aa14.12□□□□□ -0.15
RPL38-205ENST00000530646 CHD8Q9HCK8 2581 aa14.11□□□□□ -0.15
RPL38-205ENST00000530646 ICE1Q9Y2F5 2266 aa14.11□□□□□ -0.15
RPL38-205ENST00000530646 PCNX1Q96RV3 2341 aa14.11□□□□□ -0.15
RPL38-205ENST00000530646 A0A087WX48 190 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms