RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 HIST1H2BAQ96A08 127 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 C11orf52Q96A22 123 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 SLC35B3Q9H1N7 401 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 A0A0J9YX75 114 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 IGLV2-11P01706 119 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 CENPWQ5EE01 88 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 EBLN2Q6P2I7 272 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 Q86TA4 180 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 MRPL53Q96EL3 112 aaKnown RBP7.89□□□□□ -1.15
SOX6-213ENST00000530378 SMIM7Q9BQ49 75 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 AGPAT4-IT1Q9H0P7 198 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 SAV1Q9H4B6 383 aaPredicted RBP7.89□□□□□ -1.15
SOX6-213ENST00000530378 C19orf73Q9NVV2 129 aa7.89□□□□□ -1.15
SOX6-213ENST00000530378 ZMAT5Q9UDW3 170 aaKnown RBP7.89□□□□□ -1.15
SOX6-213ENST00000530378 TRBV20OR9-2A0A075B6H5 130 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 RBMY1BA6NDE4 496 aaKnown RBP7.88□□□□□ -1.15
SOX6-213ENST00000530378 RBMY1EA6NEQ0 496 aaKnown RBP7.88□□□□□ -1.15
SOX6-213ENST00000530378 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 K7EQM0 130 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 RBMY1DP0C7P1 496 aaKnown RBP7.88□□□□□ -1.15
SOX6-213ENST00000530378 RPL35AP18077 110 aaKnown RBP7.88□□□□□ -1.15
SOX6-213ENST00000530378 ADCYAP1P18509 176 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 FLI1Q01543 452 aaPredicted RBP7.88□□□□□ -1.15
SOX6-213ENST00000530378 TMEM78Q5T7P6 136 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 FOXI2Q6ZQN5 318 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 C8orf49Q96NF6 230 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 CLEC5AQ9NY25 188 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 PSG8Q9UQ74 426 aa7.88□□□□□ -1.15
SOX6-213ENST00000530378 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 CT45A10P0DMU9 189 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 HLA-DRB4P13762 266 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 KIR3DS1Q14943 382 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 SOHLH1Q5JUK2 328 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 UQCC3Q6UW78 93 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 TMEM75Q8N9X5 138 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 HLA-DRB4X5D2U9 266 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 TMEM218A2RU14 115 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 F8W036 122 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 M0R2Z0 102 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 GNG4P50150 75 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 EGFEM1PQ0D2K5 195 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 NDUFA5Q16718 116 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 STHQ8IWL8 128 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 TVP23CQ96ET8 276 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 FMC1Q96HJ9 113 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 IGF2BP2-AS1Q96M15 143 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 TCEAL7Q9BRU2 100 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 SRD5A3Q9H8P0 318 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 PPP1R14DQ9NXH3 145 aa7.87□□□□□ -1.15
SOX6-213ENST00000530378 NBEAL2Q6ZNJ1 2754 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 TRAV12-2A0A075B6T6 113 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 H3BMM0 161 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 MGST1P10620 155 aaKnown RBP7.86□□□□□ -1.15
SOX6-213ENST00000530378 ZNF138P52744 262 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 TMEM183BQ1AE95 376 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 PRR9Q5T870 116 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 PRR27Q6MZM9 219 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 C9orf47Q6ZRZ4 202 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 Q8N1Y9 231 aa7.86□□□□□ -1.15
SOX6-213ENST00000530378 EIF4E3Q8N5X7 224 aaKnown RBP7.86□□□□□ -1.15
SOX6-213ENST00000530378 RBAKDNA6NC62 111 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 Q6ZQT7 251 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 BAGE2Q86Y30 109 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 SMDT1Q9H4I9 107 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 ZNF492Q9P255 531 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 SERTM2A0A1B0GWG4 89 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 DUSP14O95147 198 aaKnown RBP7.85□□□□□ -1.15
SOX6-213ENST00000530378 LTAP01374 205 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 OR5I1Q13606 314 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 ADIRFQ15847 76 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 ZC2HC1AQ96GY0 325 aa7.85□□□□□ -1.15
SOX6-213ENST00000530378 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
SOX6-213ENST00000530378 AMTNQ6UX39 209 aa7.84□□□□□ -1.15
SOX6-213ENST00000530378 TRPT1Q86TN4 253 aaKnown RBP7.84□□□□□ -1.15
SOX6-213ENST00000530378 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.15
SOX6-213ENST00000530378 TUBA4BQ9H853 241 aa7.84□□□□□ -1.15
SOX6-213ENST00000530378 K7EN84 100 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 GCGP01275 180 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 RNASE4P34096 147 aaKnown RBP7.83□□□□□ -1.16
SOX6-213ENST00000530378 ZNF80P51504 273 aaPredicted RBP7.83□□□□□ -1.16
SOX6-213ENST00000530378 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 OCC1Q8TAD7 63 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 LINC00477Q96M19 166 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 NIPSNAP3BQ9BS92 247 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 XCL2Q9UBD3 114 aa7.83□□□□□ -1.16
SOX6-213ENST00000530378 APOC3P02656 99 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 GPX1P07203 203 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
SOX6-213ENST00000530378 TAS2R60P59551 318 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 CTAG1AP78358 180 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 TMEM241Q24JQ0 296 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 ZFAND2AQ8N6M9 145 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 FAM110AQ9BQ89 295 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms