RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 LRTM2Q8N967 370 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 DYNC2LI1Q8TCX1 351 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 DEFB104AQ8WTQ1 72 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 PCNPQ8WW12 178 aaKnown RBP6.08□□□□□ -1.44
VPS11-203ENST00000529545 S100ZQ8WXG8 99 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 DIRAS2Q96HU8 199 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 ST6GAL2Q96JF0 529 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 MIXL1Q9H2W2 232 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 NPVFQ9HCQ7 196 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 MGAT4CQ9UBM8 478 aa6.08□□□□□ -1.44
VPS11-203ENST00000529545 H3BTX0 84 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 CTDSP2O14595 271 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 COX7A2P2O60397 106 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 SPINK4O60575 86 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 PRAF2O60831 178 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 CRYGDP07320 174 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 HOXB5P09067 269 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 SRIP30626 198 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 FAUP35544 74 aaKnown RBP6.07□□□□□ -1.44
VPS11-203ENST00000529545 CRYBA4P53673 196 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 TCL1AP56279 114 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 RRAS2P62070 204 aaPredicted RBP6.07□□□□□ -1.44
VPS11-203ENST00000529545 ANXA2RQ3ZCQ2 193 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 C4orf46Q504U0 113 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 TEPPQ6URK8 271 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 PATE2Q6UY27 113 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 ZNF546Q86UE3 836 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 C11orf72Q8NBR9 251 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 C8orf49Q96NF6 230 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 PSENENQ9NZ42 101 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 KLF12Q9Y4X4 402 aa6.07□□□□□ -1.44
VPS11-203ENST00000529545 TRGV4A0A0C4DH28 118 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 LINC00854A0A1B0GVQ3 168 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 FNDC10F2Z333 226 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 K7EPK0 472 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 SLC17A3O00476 420 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 MPDU1O75352 247 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 SLC38A11Q08AI6 406 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 GUK1Q16774 197 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 WFDC10BQ8IUB3 73 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 OR10P1Q8NGE3 313 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 VGLL1Q99990 258 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 ARPC5LQ9BPX5 153 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 TXNDC17Q9BRA2 123 aa6.06□□□□□ -1.44
VPS11-203ENST00000529545 SLIRPQ9GZT3 109 aaKnown RBP6.06□□□□□ -1.44
VPS11-203ENST00000529545 CCDC59Q9P031 241 aaKnown RBP6.06□□□□□ -1.44
VPS11-203ENST00000529545 TRAV5A0A0B4J249 113 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 E5RGE8 158 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 C1QBP02746 253 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 ORM1P02763 201 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 GPX1P07203 203 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 RNASE4P34096 147 aaKnown RBP6.05□□□□□ -1.44
VPS11-203ENST00000529545 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS11-203ENST00000529545 IFITM2Q01629 132 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 CD300CQ08708 224 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 ZNF415Q09FC8 603 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 FHL2Q14192 279 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 IBA57Q5T440 356 aaKnown RBP6.05□□□□□ -1.44
VPS11-203ENST00000529545 C10orf113Q5VZT2 155 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 LINC00477Q96M19 166 aa6.05□□□□□ -1.44
VPS11-203ENST00000529545 MRPL32Q9BYC8 188 aaKnown RBP6.05□□□□□ -1.44
VPS11-203ENST00000529545 MRPL16Q9NX20 251 aaKnown RBP6.05□□□□□ -1.44
VPS11-203ENST00000529545 K7EQD1 137 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 AGPAT2O15120 278 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 SSSCA1O60232 199 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 SFT2D2O95562 160 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 OR4E1P0C645 316 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 METTL15P1P0C7V9 234 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 IGLC2P0DOY2 106 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 GYPEP15421 78 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 S100A1P23297 94 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 AP3S2P59780 193 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 BTN1A1Q13410 526 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 RAB31Q13636 194 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 OPCMLQ14982 345 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 Q6ZRG5 221 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 Q8N814 137 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 MCFD2Q8NI22 146 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 MRPL53Q96EL3 112 aaKnown RBP6.04□□□□□ -1.44
VPS11-203ENST00000529545 SAT2Q96F10 170 aaPredicted RBP6.04□□□□□ -1.44
VPS11-203ENST00000529545 SMIM8Q96KF7 97 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 FAM30AQ9NZY2 134 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
VPS11-203ENST00000529545 RCL1Q9Y2P8 373 aaKnown RBP6.04□□□□□ -1.44
VPS11-203ENST00000529545 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 IGHV1OR15-1A0A075B7D0 117 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 LRCOL1A6NCL2 159 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 KLLNB2CW77 178 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 C9JCJ5 164 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 H3BQ15 152 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 ZNF253O75346 499 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 NMBP08949 121 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 ERCC8Q13216 396 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 PPP1R1AQ13522 171 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 NDUFA5Q16718 116 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 SH2D6Q7Z4S9 175 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 C12orf45Q8N5I9 185 aaPredicted RBP6.03□□□□□ -1.44
VPS11-203ENST00000529545 TMEM37Q8WXS4 190 aa6.03□□□□□ -1.44
VPS11-203ENST00000529545 SLC25A21Q9BQT8 299 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms