RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 IGLC2P0DOY2 106 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 SRIP30626 198 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 TCL1AP56279 114 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 RAB31Q13636 194 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 SAT2Q96F10 170 aaPredicted RBP9.15□□□□□ -0.94
HIF3A-212ENST00000529205 LINC00477Q96M19 166 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 CCDC32Q9BV29 185 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 KLF12Q9Y4X4 402 aa9.15□□□□□ -0.94
HIF3A-212ENST00000529205 TRGV4A0A0C4DH28 118 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 GPX1P07203 203 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
HIF3A-212ENST00000529205 OPCMLQ14982 345 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 TMEM14EPQ6UXP3 125 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 DEDD2Q8WXF8 326 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
HIF3A-212ENST00000529205 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 VGLL1Q99990 258 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 ARPC5LQ9BPX5 153 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 GGACTQ9BVM4 153 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 MRPL32Q9BYC8 188 aaKnown RBP9.14□□□□□ -0.95
HIF3A-212ENST00000529205 FLVCR2Q9UPI3 526 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 FAT1Q14517 4588 aa9.14□□□□□ -0.95
HIF3A-212ENST00000529205 H3BQ15 152 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 TSC22D2O75157 780 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 ZNF253O75346 499 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 CCNKO75909 580 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 SCGB1D2O95969 90 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 OR4E1P0C645 316 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 TAS2R30P59541 319 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 UBE2MP61081 183 aaKnown RBP9.13□□□□□ -0.95
HIF3A-212ENST00000529205 HAMPP81172 84 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 TRIQKQ629K1 86 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 C12orf45Q8N5I9 185 aaPredicted RBP9.13□□□□□ -0.95
HIF3A-212ENST00000529205 SYT8Q8NBV8 401 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 TMEM37Q8WXS4 190 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 DNAJC4Q9NNZ3 241 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
HIF3A-212ENST00000529205 PRELID1Q9Y255 219 aa9.13□□□□□ -0.95
HIF3A-212ENST00000529205 KLLNB2CW77 178 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 E5RGE8 158 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 ORM1P02763 201 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 CRYGDP07320 174 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 ASAH1Q13510 395 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 FHL2Q14192 279 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 WFDC10BQ8IUB3 73 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 PFDN5Q99471 154 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 TXNDC17Q9BRA2 123 aa9.12□□□□□ -0.95
HIF3A-212ENST00000529205 TRAV5A0A0B4J249 113 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 C9orf170A2RU37 121 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
HIF3A-212ENST00000529205 K7EQD1 137 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 LYRM1O43325 122 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 NDUFB6O95139 128 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 NMBP08949 121 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 CAMLGP49069 296 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 CD300CQ08708 224 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 ERCC8Q13216 396 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 MORN5Q5VZ52 161 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 DEFB104AQ8WTQ1 72 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 AAMDCQ9H7C9 122 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 TIMM9Q9Y5J7 89 aa9.11□□□□□ -0.95
HIF3A-212ENST00000529205 IGHV1OR15-1A0A075B7D0 117 aa9.1□□□□□ -0.95
HIF3A-212ENST00000529205 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
HIF3A-212ENST00000529205 IQCF2Q8IXL9 164 aa9.1□□□□□ -0.95
HIF3A-212ENST00000529205 MGST2Q99735 147 aa9.1□□□□□ -0.95
HIF3A-212ENST00000529205 TRBV19A0A075B6N1 114 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 C9JCJ5 164 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 M0R3E3 92 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 C1QBP02746 253 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 GYPEP15421 78 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 CRISP2P16562 243 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
HIF3A-212ENST00000529205 SH2D6Q7Z4S9 175 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 Q8N814 137 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 FAM19A4Q96LR4 140 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
HIF3A-212ENST00000529205 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
HIF3A-212ENST00000529205 NAP1L6A6NFF2 107 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 L7N2F9 121 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 VAMP2P63027 116 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 PDE6HQ13956 83 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 C9orf47Q6ZRZ4 202 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 NRARPQ7Z6K4 114 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 C20orf85Q9H1P6 137 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
HIF3A-212ENST00000529205 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
HIF3A-212ENST00000529205 LRCOL1A6NCL2 159 aa9.07□□□□□ -0.96
HIF3A-212ENST00000529205 TCRBP04435 133 aa9.07□□□□□ -0.96
HIF3A-212ENST00000529205 INPP1P49441 399 aa9.07□□□□□ -0.96
HIF3A-212ENST00000529205 BCAP31P51572 246 aa9.07□□□□□ -0.96
HIF3A-212ENST00000529205 MIC13Q5XKP0 118 aa9.07□□□□□ -0.96
HIF3A-212ENST00000529205 TMEM14CQ9P0S9 112 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms