RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 RIGQ13278 110 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 OR5I1Q13606 314 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 MMDQ15546 238 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 LTC4SQ16873 150 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 C1orf185Q5T7R7 199 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 MRPL54Q6P161 138 aaKnown RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 Q6ZN92 141 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 MIR17HGQ75NE6 70 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 ZCCHC24Q8N2G6 241 aaKnown RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 TMEM256Q8N2U0 113 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 C8orf46Q8TAG6 207 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 ITLN1Q8WWA0 313 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 IGF2BP2-AS1Q96M15 143 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 NDFIP1Q9BT67 221 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 TMEM208Q9BTX3 173 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 TMEM70Q9BUB7 260 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 DERL1Q9BUN8 251 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 MAP1LC3CQ9BXW4 147 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 RPP21Q9H633 154 aaKnown RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 OTORQ9NRC9 128 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 TMEM14CQ9P0S9 112 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 KAAG1Q9UBP8 84 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 EPDR1Q9UM22 224 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 PPIAL4AQ9Y536 164 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 DNHD1Q96M86 4753 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 APC2O95996 2303 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 TNCP24821 2201 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.75□□□□□ -1.81
CD44-230ENST00000528922 IGHV1-69-2A0A0G2JMI3 117 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 GRIFINA4D1Z8 144 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 SHISA9B4DS77 424 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 SLC17A3O00476 420 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 NBEAP1P0C6P0 100 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 SAA1P0DJI8 122 aaPredicted RBP3.75□□□□□ -1.81
CD44-230ENST00000528922 CT45A10P0DMU9 189 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 IGLC2P0DOY2 106 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 IGLC3P0DOY3 106 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 CTRLP40313 264 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 RAB9AP51151 201 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 FOXA3P55318 350 aaPredicted RBP3.75□□□□□ -1.81
CD44-230ENST00000528922 PDE6HQ13956 83 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 SPINK9Q5DT21 86 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 GCSAMLQ5JQS6 135 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 ZNF841Q6ZN19 808 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 VASH2Q86V25 355 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 TPRX1Q8N7U7 411 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 ZNRF1Q8ND25 227 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 ST6GALNAC3Q8NDV1 305 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 OR4F17Q8NGA8 305 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 C18orf32Q8TCD1 76 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 GAFA1Q96PS6 74 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 FAM103A1Q9BTL3 118 aaKnown RBP3.75□□□□□ -1.81
CD44-230ENST00000528922 OCR1Q9BZK8 76 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 RAB1BQ9H0U4 201 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 JPT2Q9H910 190 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 LPAR2Q9HBW0 351 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 ZNF355PQ9NSJ1 428 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 HIGD1AQ9Y241 93 aa3.75□□□□□ -1.81
CD44-230ENST00000528922 SVILO95425 2214 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 IGHV2-26A0A0B4J1V2 119 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 TRAV3A0A0B4J244 114 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 HIGD1CA8MV81 97 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 GGTLC3B5MD39 225 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 H0YJW9 148 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 CDX4O14627 284 aaPredicted RBP3.74□□□□□ -1.81
CD44-230ENST00000528922 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 IGHV1-46P01743 117 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 CRYGCP07315 174 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 SNRPCP09234 159 aaKnown RBP3.74□□□□□ -1.81
CD44-230ENST00000528922 C3orf79P0CE67 100 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 NTF3P20783 257 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 TSPOP30536 169 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 CEACAM3P40198 252 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 RPL27AP46776 148 aaKnown RBP3.74□□□□□ -1.81
CD44-230ENST00000528922 ZNF83P51522 516 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 SEC11AP67812 179 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 PSG9Q00887 426 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 LEMD1Q68G75 181 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 PVRIGQ6DKI7 326 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 SLC25A34Q6PIV7 304 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 TCF23Q7RTU1 214 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 LINC00305Q7Z4B0 112 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 SPATA12Q7Z6I5 190 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 DOLPP1Q86YN1 238 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 BPIFA4PQ86YQ2 179 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 VKORC1L1Q8N0U8 176 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 POM121L12Q8N7R1 296 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 NUP35Q8NFH5 326 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 FDCSPQ8NFU4 85 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 OR8B3Q8NGG8 313 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 OR1N2Q8NGR9 330 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 OR10AG1Q8NH19 301 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 AP1S3Q96PC3 154 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 OR8B2Q96RD0 313 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 CLEC5AQ9NY25 188 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 THYN1Q9P016 225 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 ZFHX3Q15911 3703 aa3.74□□□□□ -1.81
CD44-230ENST00000528922 RAI1Q7Z5J4 1906 aaPredicted RBP3.74□□□□□ -1.81
CD44-230ENST00000528922 TLN1Q9Y490 2541 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms