RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	EXOC3-AS1	Q8N2X6	119 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ODF3	Q96PU9	254 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851	C20orf144	Q9BQM9	153 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ZNF471	Q9BX82	626 aa	Predicted RBP	5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851	KRTAP17-1	Q9BYP8	105 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851		Q9H3A6	140 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851	C11orf68	Q9H3H3	251 aa	Known RBP	5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851	OTOR	Q9NRC9	128 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851		X6R8D5	127 aa		5.62	□□□□□ -1.51
MS4A6A-208	ENST00000528851		A0A0J9YWU9	116 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	CTXND1	A0A1B0GTU2	59 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TMEM189	A5PLL7	270 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	UMAD1	C9J7I0	102 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851		M0R3E3	92 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	CRX	O43186	299 aa	Predicted RBP	5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	NMB	P08949	121 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TPT1	P13693	172 aa	Known RBP	5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	LCE4A	Q5TA78	99 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	C9orf47	Q6ZRZ4	202 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	C1orf158	Q8N1D5	194 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	PHYHIPL	Q96FC7	376 aa		5.61	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TRBV7-9	A0A0J9YWB2	115 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ARL14EPL	P0DKL9	152 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	CT45A10	P0DMU9	189 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	GCHFR	P30047	84 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	LEP	P41159	167 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	SPINK13	Q1W4C9	94 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	EIF5AL1	Q6IS14	154 aa	Known RBP	5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	DPPA3	Q6W0C5	159 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TMEM256	Q8N2U0	113 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851		Q8NAQ8	132 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	CMTM2	Q8TAZ6	248 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	AGPAT4-IT1	Q9H0P7	198 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	SERTM2	A0A1B0GWG4	89 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	DIRC3	C9JPN6	131 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851		M0R2Z0	102 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	HMGB3	O15347	200 aa	Known RBP	5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	INS	P01308	110 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	HBE1	P02100	147 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	RBMY1A1	P0DJD3	496 aa	Known RBP	5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	RBMY1C	P0DJD4	496 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	RBMY1F	Q15415	496 aa	Known RBP	5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ZNF726P1	Q15940	193 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TMEM78	Q5T7P6	136 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	STOML3	Q8TAV4	291 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	C11orf45	Q8TAV5	145 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	MBD3L1	Q8WWY6	194 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	FAM19A4	Q96LR4	140 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TMEM208	Q9BTX3	173 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	NKX6-2	Q9C056	277 aa	Predicted RBP	5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	LENEP	Q9Y5L5	61 aa		5.6	□□□□□ -1.51
MS4A6A-208	ENST00000528851	IGHV4-28	A0A0C4DH34	117 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851		A0A1W2PRE2	83 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	EIF3G	O75821	320 aa	Known RBP eCLIP	5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	CRISP2	P16562	243 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	RAB5C	P51148	216 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ZNF138	P52744	262 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ERCC8	Q13216	396 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	RRN3P1	Q2M238	152 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ZFP69	Q49AA0	526 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	SLC51B	Q86UW2	128 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	TMED6	Q8WW62	240 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	LINC01587	Q99440	93 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	ZNF492	Q9P255	531 aa		5.59	□□□□□ -1.51
MS4A6A-208	ENST00000528851	IGHV3OR16-12	A0A075B7B8	117 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	TEX48	A0A1B0GUV7	120 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	CXorf65	A6NEN9	183 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851		H7BYZ3	331 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	TG	P01266	2768 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	TAS2R60	P59551	318 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	SUMO1	P63165	101 aa	Known RBP	5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	CASC10	Q5T4H9	136 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	AGRN	O00468	2067 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	TRAV12-2	A0A075B6T6	113 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	FBLL1	A6NHQ2	334 aa	Known RBP	5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	KLLN	B2CW77	178 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851		K7EQM0	130 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	SPART-AS1	P0CW21	52 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	ZNF493	Q6ZR52	646 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	SSX7	Q7RTT5	188 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	SLC7A5P1	Q8MH63	180 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	C5orf17	Q8NAS9	161 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	VGLL1	Q99990	258 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	EPDR1	Q9UM22	224 aa		5.58	□□□□□ -1.52
MS4A6A-208	ENST00000528851	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	MAP1LC3B2	A6NCE7	125 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	C11orf94	C9JXX5	98 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	DEFB4A	O15263	64 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	ZNF324	O75467	553 aa	Predicted RBP	5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	IGKV2D-40	P01614	121 aa	Predicted RBP	5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	GPX1	P07203	203 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	PRB4	P10163	310 aa	Predicted RBP	5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	FHIT	P49789	147 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	GFI1B	Q5VTD9	330 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	CCDC28A	Q8IWP9	274 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	SFT2D1	Q8WV19	159 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	LINC00467	Q9BRT7	94 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	NIPSNAP3B	Q9BS92	247 aa		5.57	□□□□□ -1.52
MS4A6A-208	ENST00000528851	MAP1LC3B	Q9GZQ8	125 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms