RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
PTPN22-207ENST00000528414 RNF126Q9BV68 326 aa2.8□□□□□ -1.96
PTPN22-207ENST00000528414 PLAC1Q9HBJ0 212 aa2.8□□□□□ -1.96
PTPN22-207ENST00000528414 LINC00527Q9UJ94 153 aa2.8□□□□□ -1.96
PTPN22-207ENST00000528414 HILPDAQ9Y5L2 63 aa2.8□□□□□ -1.96
PTPN22-207ENST00000528414 LYSTQ99698 3801 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 DNHD1Q96M86 4753 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 IGLV3-16A0A075B6K0 115 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 TRGV11A0A075B6L2 103 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 TRAV8-3A0A0A6YYJ7 113 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 A0A0G2JRQ6 117 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 FAM24AA6NFZ4 105 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 C2orf70A6NJV1 201 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 C16orf97H3BN30 126 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 SLC25A14O95258 325 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-207ENST00000528414 IGHV4-31P0DP07 118 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 SLC25A16P16260 332 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 NPC2P61916 151 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 CLEC19AQ6UXS0 136 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 FOXL2NBQ6ZUU3 175 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 OR8A1Q8NGG7 326 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 RFESDQ8TAC1 157 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 FLVCR1-AS1Q8TAF5 88 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 CNRIP1Q96F85 164 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-207ENST00000528414 OR2A5Q96R48 311 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 ZNF747Q9BV97 191 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 GABARAPL3Q9BY60 117 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 FAM208BQ5VWN6 2430 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 IGKV1-9A0A0C4DH69 117 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 ANGPTL7O43827 346 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 JTBO76095 146 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 CPSF4O95639 269 aaKnown RBP2.79□□□□□ -1.96
PTPN22-207ENST00000528414 SPINK2P20155 84 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 IL3RAP26951 378 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 SSR2P43308 183 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 MARCH3Q86UD3 253 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 TMEM230Q96A57 120 aa2.79□□□□□ -1.96
PTPN22-207ENST00000528414 IGLL5B9A064 214 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 TMEM256-PLSCR3K7ERE1 68 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 WNT9BO14905 357 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 SMIM13P0DJ93 91 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 EBLN2Q6P2I7 272 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 CD177Q8N6Q3 437 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 IL1F10Q8WWZ1 152 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 LYZL4Q96KX0 146 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 TRAV17A0A0B4J275 112 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 FSHBP01225 129 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 TRBV12-3P01733 135 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 UBE2G1P62253 170 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 GUSBP11Q6P575 273 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 TMEM136Q6ZRR5 245 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 GEMIN6Q8WXD5 167 aaKnown RBP2.78□□□□□ -1.96
PTPN22-207ENST00000528414 DOCK7Q96N67 2140 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 FAM103A1Q9BTL3 118 aaKnown RBP2.78□□□□□ -1.96
PTPN22-207ENST00000528414 KIAA2026Q5HYC2 2103 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 CUL9Q8IWT3 2517 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 CHD6Q8TD26 2715 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 SSSCA1O60232 199 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 INSL4Q14641 139 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 RPL7L1Q6DKI1 246 aaKnown RBP2.78□□□□□ -1.96
PTPN22-207ENST00000528414 LRRC29Q8WV35 223 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 CHCHD10Q8WYQ3 142 aaPredicted RBP2.78□□□□□ -1.96
PTPN22-207ENST00000528414 CHAC1Q9BUX1 264 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 CALYQ9NYX4 217 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 LINC00474Q9P2X8 69 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 MOB4Q9Y3A3 225 aa2.78□□□□□ -1.96
PTPN22-207ENST00000528414 DNAH17Q9UFH2 4485 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 GVINP1Q7Z2Y8 2422 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 hDV102S1A0JD36 115 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 H0YIZ8 118 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 IGKV1-5P01602 117 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 APCSP02743 223 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 CLDND2Q8NHS1 167 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 TIMM17AQ99595 171 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 PARP12Q9H0J9 701 aaKnown RBP2.77□□□□□ -1.97
PTPN22-207ENST00000528414 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 ATRXP46100 2492 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 IGKV1-27A0A075B6S5 117 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 IGKV1-8A0A0C4DH67 115 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 A0A0J9YXV3 536 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 CXCL5P42830 114 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 CCL20P78556 96 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 LCA10Q71F78 164 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 ZNF329Q86UD4 541 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 CCL13Q99616 98 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 DMXL1Q9Y485 3027 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 PRKDCP78527 4128 aaKnown RBP2.77□□□□□ -1.97
PTPN22-207ENST00000528414 BIRC6Q9NR09 4857 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 TRBV27A0A0K0K1C4 114 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 FAM181BA6NEQ2 426 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 CST7O76096 145 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 DEFB113Q30KQ7 82 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 MORN4Q8NDC4 146 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 OTOGQ6ZRI0 2925 aa2.77□□□□□ -1.97
PTPN22-207ENST00000528414 LAMA2P24043 3122 aaKnown RBP2.76□□□□□ -1.97
PTPN22-207ENST00000528414 TRAV8-1A0A0A6YYK1 113 aa2.76□□□□□ -1.97
PTPN22-207ENST00000528414 PGPA6NDG6 321 aa2.76□□□□□ -1.97
PTPN22-207ENST00000528414 HLA-DQA1P01909 254 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms