RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 AGPAT4-IT1Q9H0P7 198 aa9.45□□□□□ -0.9
CNKSR1-211ENST00000528001 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 TEX48A0A1B0GUV7 120 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 PGPA6NDG6 321 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 FBLL1A6NHQ2 334 aaKnown RBP9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 KLLNB2CW77 178 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 HMGB3O15347 200 aaKnown RBP9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 FXYD7P58549 80 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 SSX7Q7RTT5 188 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 C5orf17Q8NAS9 161 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 ZNF492Q9P255 531 aa9.44□□□□□ -0.9
CNKSR1-211ENST00000528001 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 MAP1LC3B2A6NCE7 125 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 H7BYZ3 331 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 HBE1P02100 147 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 RBMY1A1P0DJD3 496 aaKnown RBP9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 RBMY1CP0DJD4 496 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 ZNF138P52744 262 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 RBMY1FQ15415 496 aaKnown RBP9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 RRN3P1Q2M238 152 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 MAP1LC3BQ9GZQ8 125 aa9.43□□□□□ -0.9
CNKSR1-211ENST00000528001 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 EIF3GO75821 320 aaKnown RBP eCLIP9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 FHITP49789 147 aa9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 TAS2R60P59551 318 aa9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 GFI1BQ5VTD9 330 aa9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
CNKSR1-211ENST00000528001 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 K7EQM0 130 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 PPT1P50897 306 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 ERCC8Q13216 396 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 ZNF493Q6ZR52 646 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 VGLL1Q99990 258 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
CNKSR1-211ENST00000528001 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 GGTLC3B5MD39 225 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 TCRAP04437 139 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 SULT1A2P50226 295 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 CD300CQ08708 224 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 ZFAND2AQ8N6M9 145 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 PYGO2Q9BRQ0 406 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 NIPSNAP3BQ9BS92 247 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
CNKSR1-211ENST00000528001 LOC102723971A0A1B0GUV8 181 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 C7orf71A4D174 169 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 FAM74A7A6NL05 159 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 C11orf94C9JXX5 98 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 ZNF324O75467 553 aaPredicted RBP9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 GPX1P07203 203 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 H2AFB1P0C5Y9 115 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 SPART-AS1P0CW21 52 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 HIST1H2BAQ96A08 127 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 LINC01587Q99440 93 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 ATG101Q9BSB4 218 aa9.39□□□□□ -0.91
CNKSR1-211ENST00000528001 CXorf65A6NEN9 183 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 LYRM9A8MSI8 78 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 TEX46H3BTG2 121 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 FGF8P55075 233 aaPredicted RBP9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 KIR3DS1Q14943 382 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 Q6AWC8 147 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 GOLT1AQ6ZVE7 132 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 CCDC28AQ8IWP9 274 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 IQCF2Q8IXL9 164 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 CYB561D1Q8N8Q1 229 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 TMPRSS5Q9H3S3 457 aa9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 YTHDF2Q9Y5A9 579 aaKnown RBP9.38□□□□□ -0.91
CNKSR1-211ENST00000528001 DEFB4AO15263 64 aa9.37□□□□□ -0.91
CNKSR1-211ENST00000528001 PRB4P10163 310 aaPredicted RBP9.37□□□□□ -0.91
CNKSR1-211ENST00000528001 ANXA2RQ3ZCQ2 193 aa9.37□□□□□ -0.91
CNKSR1-211ENST00000528001 RNASE8Q8TDE3 154 aaKnown RBP9.37□□□□□ -0.91
CNKSR1-211ENST00000528001 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
CNKSR1-211ENST00000528001 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 ZNF705GA8MUZ8 300 aaPredicted RBP9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 F6UZH7 168 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 Q8TAT8 98 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 TXNDC17Q9BRA2 123 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 NDFIP1Q9BT67 221 aa9.36□□□□□ -0.91
CNKSR1-211ENST00000528001 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
CNKSR1-211ENST00000528001 IFNA7P01567 189 aa9.35□□□□□ -0.91
CNKSR1-211ENST00000528001 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms