RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 TEP1Q99973 2627 aaKnown RBP15.45■□□□□ 0.06
SMCO4-203ENST00000526869 TRAV9-1A0A075B6T8 112 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 C19orf71A6NCJ1 209 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 K7EQG2 157 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 GBGT1Q8N5D6 347 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 PRR25Q96S07 402 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 VGLL1Q99990 258 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 PYGO2Q9BRQ0 406 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 NDFIP1Q9BT67 221 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 IL36BQ9NZH7 164 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 URGCP-MRPS24S4R325 110 aa15.45■□□□□ 0.06
SMCO4-203ENST00000526869 CUBNO60494 3623 aa15.44■□□□□ 0.06
SMCO4-203ENST00000526869 PAFAH1B2P68402 229 aa15.44■□□□□ 0.06
SMCO4-203ENST00000526869 SRSF2Q01130 221 aaKnown RBP15.44■□□□□ 0.06
SMCO4-203ENST00000526869 HIST2H2BDQ6DRA6 164 aa15.44■□□□□ 0.06
SMCO4-203ENST00000526869 NUDT10Q8NFP7 164 aa15.44■□□□□ 0.06
SMCO4-203ENST00000526869 NUDT11Q96G61 164 aa15.44■□□□□ 0.06
SMCO4-203ENST00000526869 NPIPB6E9PJ23 425 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 GATCO43716 136 aaKnown RBP15.43■□□□□ 0.06
SMCO4-203ENST00000526869 RAB5AP20339 215 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 ZNF138P52744 262 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 KRTAP10-3P60369 221 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 CT83Q5H943 113 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 TMEM78Q5T7P6 136 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 PRR27Q6MZM9 219 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.43■□□□□ 0.06
SMCO4-203ENST00000526869 OR4B1Q8NGF8 309 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 ZC2HC1AQ96GY0 325 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 LENEPQ9Y5L5 61 aa15.43■□□□□ 0.06
SMCO4-203ENST00000526869 IGKV3-7A0A075B6H7 116 aa15.42■□□□□ 0.06
SMCO4-203ENST00000526869 CT45A10P0DMU9 189 aa15.42■□□□□ 0.06
SMCO4-203ENST00000526869 OR10J6PQ8NGY7 276 aa15.42■□□□□ 0.06
SMCO4-203ENST00000526869 DYNLRB2Q8TF09 96 aa15.42■□□□□ 0.06
SMCO4-203ENST00000526869 LINC00477Q96M19 166 aa15.42■□□□□ 0.06
SMCO4-203ENST00000526869 AGPAT4-IT1Q9H0P7 198 aa15.42■□□□□ 0.06
SMCO4-203ENST00000526869 TGIF2-C20orf24A0A0A6YYL0 155 aa15.41■□□□□ 0.06
SMCO4-203ENST00000526869 TRAV25A0A0B4J276 109 aa15.41■□□□□ 0.06
SMCO4-203ENST00000526869 ZNF705GA8MUZ8 300 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-203ENST00000526869 P01737 135 aa15.41■□□□□ 0.06
SMCO4-203ENST00000526869 CXCL1P09341 107 aa15.41■□□□□ 0.06
SMCO4-203ENST00000526869 SNRPD3P62318 126 aaKnown RBP15.41■□□□□ 0.06
SMCO4-203ENST00000526869 ERCC8Q13216 396 aa15.41■□□□□ 0.06
SMCO4-203ENST00000526869 DAZAP1Q96EP5 407 aaKnown RBP15.41■□□□□ 0.06
SMCO4-203ENST00000526869 RPP21Q9H633 154 aaKnown RBP15.41■□□□□ 0.06
SMCO4-203ENST00000526869 TRBV7-9A0A0J9YWB2 115 aa15.4■□□□□ 0.06
SMCO4-203ENST00000526869 LINC00322Q6ZN03 302 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-203ENST00000526869 OR8A1Q8NGG7 326 aa15.4■□□□□ 0.06
SMCO4-203ENST00000526869 Q8TAT8 98 aa15.4■□□□□ 0.06
SMCO4-203ENST00000526869 FAM210BQ96KR6 192 aa15.4■□□□□ 0.06
SMCO4-203ENST00000526869 C8orf49Q96NF6 230 aa15.4■□□□□ 0.06
SMCO4-203ENST00000526869 SMIM27A0A1W2PRY6 76 aa15.39■□□□□ 0.05
SMCO4-203ENST00000526869 DEFB114Q30KQ6 69 aa15.39■□□□□ 0.05
SMCO4-203ENST00000526869 NSUN5P1Q3KNT7 163 aa15.39■□□□□ 0.05
SMCO4-203ENST00000526869 SMUG1Q53HV7 270 aa15.39■□□□□ 0.05
SMCO4-203ENST00000526869 RBPMS2Q6ZRY4 209 aaKnown RBP15.39■□□□□ 0.05
SMCO4-203ENST00000526869 GPR61Q9BZJ8 451 aa15.39■□□□□ 0.05
SMCO4-203ENST00000526869 A0A1W2PPQ1 181 aa15.38■□□□□ 0.05
SMCO4-203ENST00000526869 TYMSP04818 313 aa15.38■□□□□ 0.05
SMCO4-203ENST00000526869 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
SMCO4-203ENST00000526869 WFDC3Q8IUB2 231 aa15.38■□□□□ 0.05
SMCO4-203ENST00000526869 SELENOKQ9Y6D0 94 aa15.38■□□□□ 0.05
SMCO4-203ENST00000526869 FAM231BA6NCW3 169 aa15.37■□□□□ 0.05
SMCO4-203ENST00000526869 A8MWL6 223 aa15.37■□□□□ 0.05
SMCO4-203ENST00000526869 CRIP1P50238 77 aa15.37■□□□□ 0.05
SMCO4-203ENST00000526869 FAM162BQ5T6X4 162 aa15.37■□□□□ 0.05
SMCO4-203ENST00000526869 TMEM61Q8N0U2 210 aa15.37■□□□□ 0.05
SMCO4-203ENST00000526869 TSKUQ8WUA8 353 aa15.37■□□□□ 0.05
SMCO4-203ENST00000526869 SPAG8Q99932 426 aaPredicted RBP15.37■□□□□ 0.05
SMCO4-203ENST00000526869 NIPBLQ6KC79 2804 aaeCLIP15.37■□□□□ 0.05
SMCO4-203ENST00000526869 TFPI2P48307 235 aa15.36■□□□□ 0.05
SMCO4-203ENST00000526869 FAM3BP58499 235 aaPredicted RBP15.36■□□□□ 0.05
SMCO4-203ENST00000526869 RPL19P84098 196 aaKnown RBP15.36■□□□□ 0.05
SMCO4-203ENST00000526869 ASCL2Q99929 193 aa15.36■□□□□ 0.05
SMCO4-203ENST00000526869 GFRA4Q9GZZ7 299 aa15.36■□□□□ 0.05
SMCO4-203ENST00000526869 TMA7Q9Y2S6 64 aaKnown RBP15.36■□□□□ 0.05
SMCO4-203ENST00000526869 SH2D1AO60880 128 aa15.35■□□□□ 0.05
SMCO4-203ENST00000526869 ZNF688P0C7X2 276 aa15.35■□□□□ 0.05
SMCO4-203ENST00000526869 HIST1H1AQ02539 215 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-203ENST00000526869 PSMG4Q5JS54 123 aa15.35■□□□□ 0.05
SMCO4-203ENST00000526869 FAM19A4Q96LR4 140 aa15.35■□□□□ 0.05
SMCO4-203ENST00000526869 CITED1Q99966 193 aa15.35■□□□□ 0.05
SMCO4-203ENST00000526869 SRD5A3Q9H8P0 318 aa15.35■□□□□ 0.05
SMCO4-203ENST00000526869 OR4C46A6NHA9 309 aa15.34■□□□□ 0.05
SMCO4-203ENST00000526869 CD300EQ496F6 205 aaPredicted RBP15.34■□□□□ 0.05
SMCO4-203ENST00000526869 OR2K2Q8NGT1 345 aa15.34■□□□□ 0.05
SMCO4-203ENST00000526869 ODF3Q96PU9 254 aa15.34■□□□□ 0.05
SMCO4-203ENST00000526869 FABP5P3A8MUU1 101 aa15.33■□□□□ 0.04
SMCO4-203ENST00000526869 CRISP2P16562 243 aa15.33■□□□□ 0.04
SMCO4-203ENST00000526869 RPS10P46783 165 aaKnown RBP15.33■□□□□ 0.04
SMCO4-203ENST00000526869 FOXI2Q6ZQN5 318 aa15.33■□□□□ 0.04
SMCO4-203ENST00000526869 OR2D3Q8NGH3 330 aa15.33■□□□□ 0.04
SMCO4-203ENST00000526869 NAT8BQ9UHF3 227 aa15.33■□□□□ 0.04
SMCO4-203ENST00000526869 A0A0J9YX75 114 aa15.32■□□□□ 0.04
SMCO4-203ENST00000526869 IZUMO1RA6ND01 250 aa15.32■□□□□ 0.04
SMCO4-203ENST00000526869 DUSP14O95147 198 aaKnown RBP15.32■□□□□ 0.04
SMCO4-203ENST00000526869 CA1P00915 261 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-203ENST00000526869 ZNF705DP0CH99 300 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-203ENST00000526869 ZNF705BP0CI00 300 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-203ENST00000526869 ZNF80P51504 273 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-203ENST00000526869 RPS20P60866 119 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms