RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SPANXN1Q5VSR9 72 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC01545Q5VT33 79 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LGALS9CQ6DKI2 356 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CYP2G1PQ6ZSU1 146 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 PRR15Q8IV56 129 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 OR5AS1Q8N127 324 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC00311Q8N616 119 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 ACBD7Q8N6N7 88 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MORN4Q8NDC4 146 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 FDCSPQ8NFU4 85 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MUC7Q8TAX7 377 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SMCR5Q8TEV8 140 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CARD19Q96LW7 228 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 S100A13Q99584 98 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC00467Q9BRT7 94 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 UPK3BQ9BT76 320 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SPANXDQ9BXN6 97 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 WFDC10AQ9H1F0 79 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 C14orf132Q9NPU4 83 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CDC42SE1Q9NRR8 79 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 FAIMQ9NVQ4 179 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MRPL35Q9NZE8 188 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 METTL1Q9UBP6 276 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 KLK9Q9UKQ9 250 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LSM2Q9Y333 95 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LINC00588Q9Y4M8 146 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 BAZ2AQ9UIF9 1905 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 HECW1Q76N89 1606 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MYO15BQ96JP2 1530 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 DLC1Q96QB1 1528 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CNTLNQ9NXG0 1405 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 BAZ1AQ9NRL2 1556 aaPredicted RBP0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 UHRF1BP1LA0JNW5 1464 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 IGKV1D-37A0A075B6S9 117 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAV12-2A0A075B6T6 113 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 IGKV2D-26A0A0A0MRZ7 120 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TRBV6-8A0A0A6YYG3 113 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 IGKV1-9A0A0C4DH69 117 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM30CPA0ZSE6 113 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SDHAF1A6NFY7 115 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 OR51F1A6NGY5 319 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 IFITM5A6NNB3 132 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 C3orf84H3BNL1 204 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 PPYP01298 95 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 BAALC-AS2P0C853 105 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 P0DMU3 169 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM231AP0DMU4 169 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM231CP0DMU5 169 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 FXYD2P54710 66 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SMIM11AP58511 58 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SEC11AP67812 179 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF345Q14585 488 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 ADIRFQ15847 76 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 NNATQ16517 81 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 LGALS9BQ3B8N2 356 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 KRTAP21-3Q3LHN1 58 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 C10orf128Q5T292 105 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 C1orf134Q5TEV5 83 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM14EPQ6UXP3 125 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM91Q6ZNR0 172 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF720Q7Z2F6 126 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 Q86TA4 180 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TTC9CQ8N5M4 171 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 OR10AC1Q8NH08 325 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 PFN4Q8NHR9 129 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 VSTM2AQ8TAG5 236 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 DYNLRB2Q8TF09 96 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 PATE1Q8WXA2 126 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 MGST2Q99735 147 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 NABP2Q9BQ15 211 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SNRNP25Q9BV90 132 aaKnown RBP0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 DPY30Q9C005 99 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 AGPAT4-IT1Q9H0P7 198 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 CXCL16Q9H2A7 254 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 C11orf1Q9H5F2 150 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM106BQ9NUM4 274 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 COA4Q9NYJ1 87 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 UQCR10Q9UDW1 63 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SNURFQ9Y675 71 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 CHCHD2Q9Y6H1 151 aaPredicted RBP0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SERP1Q9Y6X1 66 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 CAMSAP1Q5T5Y3 1602 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 TRIP11Q15643 1979 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 RGS12O14924 1447 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 RIC1Q4ADV7 1423 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 CD109Q6YHK3 1445 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 FGD6Q6ZV73 1430 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 PEG3Q9GZU2 1588 aa0.62□□□□□ -2.31
ECHDC1-219ENST00000526299 SCN4AP35499 1836 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 SCN10AQ9Y5Y9 1956 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 KMT2BQ9UMN6 2715 aaPredicted RBP0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 IGHV3-64A0A075B6Q5 118 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 A0A087WXM4 84 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 TRBV6-7A0A0A0MS04 114 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAV13-2A0A0B4J235 113 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 MUC21A0A0G2JKD1 596 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 A0A0G2JND7 137 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 CTXND1A0A1B0GTU2 59 aa0.61□□□□□ -2.31
ECHDC1-219ENST00000526299 PVALEFA0A1B0GWK0 134 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms