RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 ATP5SQ99766 215 aa8.16□□□□□ -1.1
HIF3A-209ENST00000525854 OR51M1Q9H341 326 aa8.16□□□□□ -1.1
HIF3A-209ENST00000525854 HECTD4Q9Y4D8 3996 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 A0A1B0GVY2 172 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 KLLNB2CW77 178 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 GAGE7O76087 117 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 NMBP08949 121 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 M6PRP20645 277 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
HIF3A-209ENST00000525854 ERCC8Q13216 396 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 OR5I1Q13606 314 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 ICAM4Q14773 271 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 TMEM78Q5T7P6 136 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 RNF141Q8WVD5 230 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 LINC00467Q9BRT7 94 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 PAXXQ9BUH6 204 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 FUT9Q9Y231 359 aa8.15□□□□□ -1.1
HIF3A-209ENST00000525854 MPC2O95563 127 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 IFNA5P01569 189 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 GPX1P07203 203 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 CRISP2P16562 243 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 RNASE4P34096 147 aaKnown RBP8.14□□□□□ -1.11
HIF3A-209ENST00000525854 FAM122CQ6P4D5 195 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 SCGB1C1Q8TD33 95 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
HIF3A-209ENST00000525854 ZNF503Q96F45 646 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 HSPB11Q9Y547 144 aa8.14□□□□□ -1.11
HIF3A-209ENST00000525854 TRAV26-1A0A087WT03 109 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 OR7C2O60412 319 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
HIF3A-209ENST00000525854 OR10J4P0C629 311 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
HIF3A-209ENST00000525854 CSN1S1P47710 185 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 TAS2R45P59539 299 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 CD300CQ08708 224 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 ANXA2RQ3ZCQ2 193 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 EIF4E3Q8N5X7 224 aaKnown RBP8.13□□□□□ -1.11
HIF3A-209ENST00000525854 ZNRF2Q8NHG8 242 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 RXFP4Q8TDU9 374 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 FXYD5Q96DB9 178 aa8.13□□□□□ -1.11
HIF3A-209ENST00000525854 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 IGKV2-40A0A087WW87 121 aaPredicted RBP8.12□□□□□ -1.11
HIF3A-209ENST00000525854 TRBV7-9A0A0J9YWB2 115 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 H3BNG1 76 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 RGS13O14921 159 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 IGKV2D-40P01614 121 aaPredicted RBP8.12□□□□□ -1.11
HIF3A-209ENST00000525854 UBE2L3P68036 154 aaKnown RBP8.12□□□□□ -1.11
HIF3A-209ENST00000525854 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 KHDC3LQ587J8 217 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 FFAR4Q5NUL3 377 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 Q6ZTI0 123 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 VGLL1Q99990 258 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 GSN-AS1Q9NRJ2 163 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 ZNF492Q9P255 531 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
HIF3A-209ENST00000525854 RBAKDNA6NC62 111 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 HOXA5P20719 270 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 ZNF138P52744 262 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 RANP62826 216 aaKnown RBP8.11□□□□□ -1.11
HIF3A-209ENST00000525854 IBA57Q5T440 356 aaKnown RBP8.11□□□□□ -1.11
HIF3A-209ENST00000525854 SSX7Q7RTT5 188 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 ZFAND2AQ8N6M9 145 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 C11orf72Q8NBR9 251 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 PHYHIPLQ96FC7 376 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 C18orf15Q96N68 181 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 SMIM3Q9BZL3 60 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 TMPRSS5Q9H3S3 457 aa8.11□□□□□ -1.11
HIF3A-209ENST00000525854 NACAE9PAV3 2078 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 TRGV1A0A0A0MS02 117 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 A0A0J9YY99 117 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 TCL1AP56279 114 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 ARPC5LQ9BPX5 153 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 Q9H3A6 140 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 HERC2O95714 4834 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
HIF3A-209ENST00000525854 IGHV1OR15-1A0A075B7D0 117 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 SPINK4O60575 86 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 ACOT6Q3I5F7 207 aaPredicted RBP8.09□□□□□ -1.11
HIF3A-209ENST00000525854 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 C6orf223Q8N319 242 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 Q8TAT8 98 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 Q9H8V8 135 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 KLF12Q9Y4X4 402 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 DNAH2Q9P225 4427 aa8.09□□□□□ -1.11
HIF3A-209ENST00000525854 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 A0A1W2PPV4 95 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 DIRC3C9JPN6 131 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 ZNF266Q14584 549 aa8.08□□□□□ -1.12
HIF3A-209ENST00000525854 FAM74A1Q5RGS3 127 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms