RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
SMCO4-202ENST00000525141 ZNF471Q9BX82 626 aaPredicted RBP8.99□□□□□ -0.97
SMCO4-202ENST00000525141 IGLL5B9A064 214 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 M0R3E3 92 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 BAP18Q8IXM2 172 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 C1orf158Q8N1D5 194 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 PHYHIPLQ96FC7 376 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 PPP1R14DQ9NXH3 145 aa8.98□□□□□ -0.97
SMCO4-202ENST00000525141 CTXND1A0A1B0GTU2 59 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 UMAD1C9J7I0 102 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 NPIPB6E9PJ23 425 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 HMGB3O15347 200 aaKnown RBP8.97□□□□□ -0.97
SMCO4-202ENST00000525141 EIF3GO75821 320 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMCO4-202ENST00000525141 CXorf1O96002 111 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 TPT1P13693 172 aaKnown RBP8.97□□□□□ -0.97
SMCO4-202ENST00000525141 STOML3Q8TAV4 291 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 RXFP4Q8TDU9 374 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 IGF2BP2-AS1Q96M15 143 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 NEU1Q99519 415 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 Q9H3A6 140 aa8.97□□□□□ -0.97
SMCO4-202ENST00000525141 SMIM9A6NGZ8 99 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 C11orf94C9JXX5 98 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 BOLA2-SMG1P6H3BVE0 249 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 GCHFRP30047 84 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 TSPOP30536 169 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 CDKN1BP46527 198 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 CSN1S1P47710 185 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 ZNF726P1Q15940 193 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 FAM74A1Q5RGS3 127 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 C9orf47Q6ZRZ4 202 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 ODF3Q96PU9 254 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 OTORQ9NRC9 128 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 TMEM167BQ9NRX6 74 aa8.96□□□□□ -0.98
SMCO4-202ENST00000525141 TRAV10A0A0B4J240 114 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 RBAKDNA6NC62 111 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 PGPA6NDG6 321 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 M0R2Z0 102 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 CRXO43186 299 aaPredicted RBP8.95□□□□□ -0.98
SMCO4-202ENST00000525141 PRM2P04554 102 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 SLC25A5P05141 298 aaKnown RBP8.95□□□□□ -0.98
SMCO4-202ENST00000525141 CT45A10P0DMU9 189 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 TCTAP57738 103 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 CD300CQ08708 224 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 SPINK13Q1W4C9 94 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 ZFP69Q49AA0 526 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 EIF5AL1Q6IS14 154 aaKnown RBP8.95□□□□□ -0.98
SMCO4-202ENST00000525141 SSX7Q7RTT5 188 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 GOLT1BQ9Y3E0 138 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 DNAH17Q9UFH2 4485 aa8.95□□□□□ -0.98
SMCO4-202ENST00000525141 PRB4P10163 310 aaPredicted RBP8.94□□□□□ -0.98
SMCO4-202ENST00000525141 DPPA3Q6W0C5 159 aa8.94□□□□□ -0.98
SMCO4-202ENST00000525141 SLC51BQ86UW2 128 aa8.94□□□□□ -0.98
SMCO4-202ENST00000525141 IGHV4-4A0A075B6R2 117 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 DEFB131BA0A096LNP1 70 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 DIRC3C9JPN6 131 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 INSP01308 110 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 NMBP08949 121 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 LEPP41159 167 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 ERCC8Q13216 396 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 TMEM256Q8N2U0 113 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 C9orf62Q8N4C0 152 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 CMTM2Q8TAZ6 248 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 TMED6Q8WW62 240 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 MBD3L1Q8WWY6 194 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 FAM19A4Q96LR4 140 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 C20orf144Q9BQM9 153 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 PGPEP1Q9NXJ5 209 aa8.93□□□□□ -0.98
SMCO4-202ENST00000525141 TRAV12-2A0A075B6T6 113 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 IGKV2-40A0A087WW87 121 aaPredicted RBP8.92□□□□□ -0.98
SMCO4-202ENST00000525141 TRBV7-9A0A0J9YWB2 115 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 A0A1W2PRE2 83 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 MAP1LC3B2A6NCE7 125 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 IGKV2D-40P01614 121 aaPredicted RBP8.92□□□□□ -0.98
SMCO4-202ENST00000525141 FHITP49789 147 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 RAB5CP51148 216 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 ZNF138P52744 262 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 EMP1P54849 157 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 VGLL1Q99990 258 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 TMEM208Q9BTX3 173 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 NKX6-2Q9C056 277 aaPredicted RBP8.92□□□□□ -0.98
SMCO4-202ENST00000525141 MAP1LC3BQ9GZQ8 125 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 ZNF492Q9P255 531 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 DKK2Q9UBU2 259 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
SMCO4-202ENST00000525141 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 TMEM189A5PLL7 270 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 CRISP2P16562 243 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 FGF8P55075 233 aaPredicted RBP8.91□□□□□ -0.98
SMCO4-202ENST00000525141 SUMO1P63165 101 aaKnown RBP8.91□□□□□ -0.98
SMCO4-202ENST00000525141 C5orf17Q8NAS9 161 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 TMPRSS5Q9H3S3 457 aa8.91□□□□□ -0.98
SMCO4-202ENST00000525141 DNAH2Q9P225 4427 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms