RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ZNF253O75346 499 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 IFNA7P01567 189 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 RNASE4P34096 147 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 CSN1S1P47710 185 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 SULT1A2P50226 295 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 NUTF2P61970 127 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 PMS2P11Q13670 270 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 PDE6HQ13956 83 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 GFI1BQ5VTD9 330 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 SAMD13Q5VXD3 122 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 TVP23CQ96ET8 276 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 C8orf49Q96NF6 230 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 PRELID1Q9Y255 219 aa3.33□□□□□ -1.88
CHMP4A-202ENST00000524955 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 SCO2A0A1W2PP80 73 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 A8MTW9 85 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 UMAD1C9J7I0 102 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 INSP01308 110 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 TCRAP04437 139 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 GPX1P07203 203 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 LEPP41159 167 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 CDKN1BP46527 198 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 ZNF138P52744 262 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 NANOS2P60321 138 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 MUC21Q5SSG8 566 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 TMEM78Q5T7P6 136 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 PRNTQ86SH4 94 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 LYPD1Q8N2G4 141 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 ZFAND2AQ8N6M9 145 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 Q8NAQ8 132 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 NHLRC2Q8NBF2 726 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 SUN5Q8TC36 379 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 MBD3L1Q8WWY6 194 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 MRPL53Q96EL3 112 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 IGF2BP2-AS1Q96M15 143 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 LINC01587Q99440 93 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 C1QTNF4Q9BXJ3 329 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 EDA2RQ9HAV5 297 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 TMEM167BQ9NRX6 74 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 ZNF492Q9P255 531 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 NAGKQ9UJ70 344 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 EPDR1Q9UM22 224 aa3.32□□□□□ -1.88
CHMP4A-202ENST00000524955 PRKDCP78527 4128 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 LOC102723971A0A1B0GUV8 181 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 C7orf71A4D174 169 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 PEX7O00628 323 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 IGLV2-11P01706 119 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 ZNF80P51504 273 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 EIF5AL1Q6IS14 154 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 DPPA3Q6W0C5 159 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 ZNF705AQ6ZN79 300 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 C9orf47Q6ZRZ4 202 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 TMEM75Q8N9X5 138 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 C5orf17Q8NAS9 161 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 IL17DQ8TAD2 202 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 RXFP4Q8TDU9 374 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 FAM19A4Q96LR4 140 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 LINC00477Q96M19 166 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 WWC2-AS2Q96NR7 200 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 CLUHP3Q96NS8 147 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 DERL1Q9BUN8 251 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 PSG8Q9UQ74 426 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 TP53TG1Q9Y2A0 90 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 GOLT1BQ9Y3E0 138 aa3.31□□□□□ -1.88
CHMP4A-202ENST00000524955 A0A1W2PRE2 83 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 RAB19A4D1S5 217 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 RBAKDNA6NC62 111 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 CXorf65A6NEN9 183 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 CBY3A6NI87 242 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 C11orf94C9JXX5 98 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 GNRH2O43555 120 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 ZNF324O75467 553 aaPredicted RBP3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 HBE1P02100 147 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 AMBPP02760 352 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 MIFP14174 115 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 HTN3P15516 51 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 TSPOP30536 169 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 AKR1C3P42330 323 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 RAB5CP51148 216 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 CEBPGP53567 150 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 UBE2G1P62253 170 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 FLI1Q01543 452 aaPredicted RBP3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 RRN3P1Q2M238 152 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 FAM222AQ5U5X8 452 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 Q86TA4 180 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 CCDC28AQ8IWP9 274 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 CYB561D1Q8N8Q1 229 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 C11orf45Q8TAV5 145 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 MUC7Q8TAX7 377 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 NIPSNAP3BQ9BS92 247 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 ATG101Q9BSB4 218 aa3.3□□□□□ -1.88
CHMP4A-202ENST00000524955 TREM1Q9NP99 234 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms