RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 HBE1P02100 147 aa10.88□□□□□ -0.67
SF3B2-202ENST00000524475 TPT1P13693 172 aaKnown RBP10.88□□□□□ -0.67
SF3B2-202ENST00000524475 LGALSLQ3ZCW2 172 aaPredicted RBP10.88□□□□□ -0.67
SF3B2-202ENST00000524475 TMEM78Q5T7P6 136 aa10.88□□□□□ -0.67
SF3B2-202ENST00000524475 TMED6Q8WW62 240 aa10.88□□□□□ -0.67
SF3B2-202ENST00000524475 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
SF3B2-202ENST00000524475 LENEPQ9Y5L5 61 aa10.88□□□□□ -0.67
SF3B2-202ENST00000524475 hCG_2014768A0A024R1R8 64 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 KLLNB2CW77 178 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 DIRC3C9JPN6 131 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 RRN3P1Q2M238 152 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 GFI1BQ5VTD9 330 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 DPPA3Q6W0C5 159 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 C11orf45Q8TAV5 145 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
SF3B2-202ENST00000524475 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 IGKV2-40A0A087WW87 121 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-202ENST00000524475 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 A0A1W2PRE2 83 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 PGPA6NDG6 321 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 H7BYZ3 331 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 DEFB4AO15263 64 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 IGKV2D-40P01614 121 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-202ENST00000524475 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-202ENST00000524475 ZNF138P52744 262 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 TAS2R60P59551 318 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 ERCC8Q13216 396 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 VGLL1Q99990 258 aa10.86□□□□□ -0.67
SF3B2-202ENST00000524475 SACSQ9NZJ4 4579 aa10.85□□□□□ -0.67
SF3B2-202ENST00000524475 LOC102723971A0A1B0GUV8 181 aa10.85□□□□□ -0.67
SF3B2-202ENST00000524475 NUPR2A6NF83 97 aa10.85□□□□□ -0.67
SF3B2-202ENST00000524475 ZFAND6Q6FIF0 208 aa10.85□□□□□ -0.67
SF3B2-202ENST00000524475 EIF5AL1Q6IS14 154 aaKnown RBP10.85□□□□□ -0.67
SF3B2-202ENST00000524475 C5orf17Q8NAS9 161 aa10.85□□□□□ -0.67
SF3B2-202ENST00000524475 NKX6-2Q9C056 277 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-202ENST00000524475 ARL2-SNX15V9GYD0 113 aa10.85□□□□□ -0.67
SF3B2-202ENST00000524475 MAP1LC3B2A6NCE7 125 aa10.84□□□□□ -0.67
SF3B2-202ENST00000524475 KIR3DS1Q14943 382 aa10.84□□□□□ -0.67
SF3B2-202ENST00000524475 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
SF3B2-202ENST00000524475 ZFAND2AQ8N6M9 145 aa10.84□□□□□ -0.67
SF3B2-202ENST00000524475 MAP1LC3BQ9GZQ8 125 aa10.84□□□□□ -0.67
SF3B2-202ENST00000524475 PLA2G2EQ9NZK7 142 aa10.84□□□□□ -0.67
SF3B2-202ENST00000524475 DNAH1Q9P2D7 4330 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 A0A1B0GVG6 124 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 C7orf71A4D174 169 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 CXorf65A6NEN9 183 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 RAB5CP51148 216 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 NANOS2P60321 138 aaKnown RBP10.83□□□□□ -0.68
SF3B2-202ENST00000524475 ZNF493Q6ZR52 646 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 MBD3L1Q8WWY6 194 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 LINC01587Q99440 93 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 PYGO2Q9BRQ0 406 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 LINC00467Q9BRT7 94 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 NIPSNAP3BQ9BS92 247 aa10.83□□□□□ -0.68
SF3B2-202ENST00000524475 ALMS1Q8TCU4 4167 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
SF3B2-202ENST00000524475 ZNF324O75467 553 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-202ENST00000524475 SPART-AS1P0CW21 52 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 CD300CQ08708 224 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 ZFP69Q49AA0 526 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-202ENST00000524475 C9orf62Q8N4C0 152 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 TMEM263Q8WUH6 116 aaKnown RBP10.82□□□□□ -0.68
SF3B2-202ENST00000524475 PHLDA1Q8WV24 401 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-202ENST00000524475 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 DKK2Q9UBU2 259 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 CELA1Q9UNI1 258 aa10.82□□□□□ -0.68
SF3B2-202ENST00000524475 PLAC8L1A1L4L8 177 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 ZNF705GA8MUZ8 300 aaPredicted RBP10.81□□□□□ -0.68
SF3B2-202ENST00000524475 TCRAP04437 139 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 GPX1P07203 203 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 FHITP49789 147 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
SF3B2-202ENST00000524475 PMS2P11Q13670 270 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 IQCF2Q8IXL9 164 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 RNASE8Q8TDE3 154 aaKnown RBP10.81□□□□□ -0.68
SF3B2-202ENST00000524475 TCEAL7Q9BRU2 100 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
SF3B2-202ENST00000524475 YTHDF2Q9Y5A9 579 aaKnown RBP10.81□□□□□ -0.68
SF3B2-202ENST00000524475 TRAV12-3A0A0B4J271 114 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 FAM74A7A6NL05 159 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 LYRM9A8MSI8 78 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 K7EQM0 130 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 FGF8P55075 233 aaPredicted RBP10.8□□□□□ -0.68
SF3B2-202ENST00000524475 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 Q8TAT8 98 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 FAM213BQ8TBF2 198 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 ATG101Q9BSB4 218 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
SF3B2-202ENST00000524475 KLK5Q9Y337 293 aaPredicted RBP10.8□□□□□ -0.68
SF3B2-202ENST00000524475 AZU1P20160 251 aa10.79□□□□□ -0.68
SF3B2-202ENST00000524475 SULT1A2P50226 295 aa10.79□□□□□ -0.68
SF3B2-202ENST00000524475 GNG5P63218 68 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms