RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 SMKR1H3BMG3 65 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 ATP6V0E1O15342 81 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 BUB3O43684 328 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 NPYP01303 97 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 ORM1P02763 201 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 RHOGP84095 191 aa8.57□□□□□ -1.04
HDAC9-228ENST00000524023 HIST1H1AQ02539 215 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-228ENST00000524023 FABP5P3A8MUU1 101 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 HBDP02042 147 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 RAB9AP51151 201 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 FXYD7P58549 80 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 ERCC8Q13216 396 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 LGALS9BQ3B8N2 356 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 LGALS9CQ6DKI2 356 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 DEFB125Q8N687 156 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 HIVEP3Q5T1R4 2406 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 GOSR1O95249 250 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 DPF1Q92782 380 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 CNFNQ9BYD5 112 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
HDAC9-228ENST00000524023 ZFHX3Q15911 3703 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 CLPSL1A2RUU4 121 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 SAA4P35542 130 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 FOXE3Q13461 319 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 RNF182Q8N6D2 247 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 IGHV3-66A0A0C4DH42 116 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 RBAKDNA6NC62 111 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 G3V318 75 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 CLEC19AQ6UXS0 136 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 SLC50A1Q9BRV3 221 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 UBTD1Q9HAC8 227 aa8.55□□□□□ -1.04
HDAC9-228ENST00000524023 SNAI2O43623 268 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 EFNA4P52798 201 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 CACNG7P62955 275 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 NHLH1Q02575 133 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 VAMP3Q15836 100 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 IL17RELQ6ZVW7 336 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 OR1N2Q8NGR9 330 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 CENPVL3A0A0U1RRI6 287 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 PPBPP02775 128 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 FGF6P10767 208 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 LMO4P61968 165 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 ERASQ7Z444 233 aa8.54□□□□□ -1.04
HDAC9-228ENST00000524023 IGHV3OR16-13A0A075B7E8 117 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 IGHV3-74A0A0B4J1X5 117 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 CD5LO43866 347 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 EEF1AKMT3Q96AZ1 226 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 NPFFR1Q9GZQ6 430 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 AGPAT4-IT1Q9H0P7 198 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 MAP1LC3AQ9H492 121 aa8.53□□□□□ -1.04
HDAC9-228ENST00000524023 TRAV8-2A0A0B4J237 113 aa8.52□□□□□ -1.04
HDAC9-228ENST00000524023 LINC01546A6NGU7 62 aa8.52□□□□□ -1.04
HDAC9-228ENST00000524023 GAS8-AS1O95177 125 aa8.52□□□□□ -1.04
HDAC9-228ENST00000524023 SFTPCP11686 197 aa8.52□□□□□ -1.04
HDAC9-228ENST00000524023 OR4C5Q8NGB2 326 aa8.52□□□□□ -1.04
HDAC9-228ENST00000524023 BPESC1Q9GZL8 116 aa8.52□□□□□ -1.04
HDAC9-228ENST00000524023 AKAP6Q13023 2319 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 TRBV7-1A0A0A6YYK4 115 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 CBY3A6NI87 242 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 NPFFO15130 113 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 PPIFP30405 207 aaKnown RBP8.52□□□□□ -1.05
HDAC9-228ENST00000524023 C11orf21Q9P2W6 132 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 CBY1Q9Y3M2 126 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
HDAC9-228ENST00000524023 SPTBN4Q9H254 2564 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 K7EP13 123 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 ZNF207O43670 478 aaKnown RBP8.51□□□□□ -1.05
HDAC9-228ENST00000524023 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 TMEM97Q5BJF2 176 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 C5orf56Q8N8D9 126 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 METTL26Q96S19 204 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 C8orf86Q6ZUL3 223 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 WFDC3Q8IUB2 231 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 RNASE8Q8TDE3 154 aaKnown RBP8.51□□□□□ -1.05
HDAC9-228ENST00000524023 MRPL53Q96EL3 112 aaKnown RBP8.51□□□□□ -1.05
HDAC9-228ENST00000524023 U3KQE9 123 aa8.51□□□□□ -1.05
HDAC9-228ENST00000524023 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
HDAC9-228ENST00000524023 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
HDAC9-228ENST00000524023 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 SMAD7O15105 426 aaKnown RBP8.49□□□□□ -1.05
HDAC9-228ENST00000524023 GATA1P15976 413 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-228ENST00000524023 EVI2AP22794 236 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 FCER1GP30273 86 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 LEPP41159 167 aa8.49□□□□□ -1.05
HDAC9-228ENST00000524023 TCTAP57738 103 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms