RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 IGLC6P0CF74 106 aa6.61□□□□□ -1.35
CSMD1-213ENST00000523488 SDIM1Q6ZPB5 146 aa6.61□□□□□ -1.35
CSMD1-213ENST00000523488 DEFB127Q9H1M4 99 aa6.61□□□□□ -1.35
CSMD1-213ENST00000523488 CALYQ9NYX4 217 aa6.61□□□□□ -1.35
CSMD1-213ENST00000523488 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 RBP4P02753 201 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 IFITM1P13164 125 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 LYZL1Q6UWQ5 148 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 TEN1Q86WV5 123 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 A0A1W2PQM1 296 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 LINC01549A6NIU2 74 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 LYZP61626 148 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 MRPL51Q4U2R6 128 aaKnown RBP6.6□□□□□ -1.35
CSMD1-213ENST00000523488 EXOC3-AS1Q8N2X6 119 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 CD177Q8N6Q3 437 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 RNF185Q96GF1 192 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 FBXL15Q9H469 300 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 NDUFA3O95167 84 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 NPYP01303 97 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 COX6B1P14854 86 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 CRIP1P50238 77 aa6.6□□□□□ -1.35
CSMD1-213ENST00000523488 FABP5P3A8MUU1 101 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 CCDC179H3BU77 68 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 K7EM74 188 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 CEACAM4O75871 244 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 ARFGEF3Q5TH69 2177 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 CRYGBP07316 175 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 SAA1P0DJI8 122 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-213ENST00000523488 NDUFV3P56181 108 aaKnown RBP6.59□□□□□ -1.35
CSMD1-213ENST00000523488 KIR2DL4Q99706 377 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 NCOR2Q9Y618 2525 aa6.59□□□□□ -1.35
CSMD1-213ENST00000523488 IGHV3OR15-7A0A075B7D8 119 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 IGHV5-10-1A0A0J9YXX1 117 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 IGLV2-23P01705 113 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 CD40P25942 277 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 C3orf36Q3SXR2 165 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 SPINK14Q6IE38 97 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 C1orf210Q8IVY1 113 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 HIGD1AQ9Y241 93 aa6.59□□□□□ -1.36
CSMD1-213ENST00000523488 SRRM5B3KS81 715 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 RPL13AP40429 203 aaKnown RBP6.58□□□□□ -1.36
CSMD1-213ENST00000523488 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 IL17RELQ6ZVW7 336 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 ZNRF1Q8ND25 227 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 TMEM167AQ8TBQ9 72 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 CFAP54Q96N23 3096 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 IGHV4-4A0A075B6R2 117 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 WT1P19544 449 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-213ENST00000523488 ASIPP42127 132 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 MAGEA5P43359 124 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 PPP1R27Q86WC6 154 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 KLF14Q8TD94 323 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-213ENST00000523488 IGLV1-44P01699 117 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 CD7P09564 240 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 LAMA1P25391 3075 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 HCP5Q6MZN7 132 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 MAPKAPK5-AS1Q8N8E1 139 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 AAMDCQ9H7C9 122 aa6.58□□□□□ -1.36
CSMD1-213ENST00000523488 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
CSMD1-213ENST00000523488 PLXNB1O43157 2135 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 IGKV3-15P01624 115 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 IGKV1-16P04430 117 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 ZGRF1Q86YA3 2104 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 LINC00311Q8N616 119 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
CSMD1-213ENST00000523488 IGF2RP11717 2491 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 J3KRW8 73 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 FCN3O75636 299 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 ID1P41134 155 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 MZT1Q08AG7 82 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSMD1-213ENST00000523488 PLCE1Q9P212 2302 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 ATRXP46100 2492 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 CREBBPQ92793 2442 aa6.57□□□□□ -1.36
CSMD1-213ENST00000523488 IGKV1D-17A0A075B6S4 117 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 SLC25A16P16260 332 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 PLGLAQ15195 96 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 NOTCH2Q04721 2471 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 WDFY3Q8IZQ1 3526 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 CELSR3Q9NYQ7 3312 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 APELAP0DMC3 54 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 IL11RAQ14626 422 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 C10orf55Q5SWW7 151 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 AJUBAQ96IF1 538 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 FAM208BQ5VWN6 2430 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 Q0VFX4 171 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 ATP1A1-AS1Q5TC04 95 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 C6orf15Q6UXA7 325 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-213ENST00000523488 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 DEFB108BQ8NET1 73 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 SPANXDQ9BXN6 97 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 NAV3Q8IVL0 2385 aa6.56□□□□□ -1.36
CSMD1-213ENST00000523488 DIAPH2-AS1Q14236 149 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 RAXQ9Y2V3 346 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 TM4SF5O14894 197 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 ORM1P02763 201 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms