RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DTX2Q86UW9 622 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 SORL1Q92673 2214 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 H3BRN7 92 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 SUMO2P61956 95 aaKnown RBP10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 C8orf49Q96NF6 230 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 Q8N7P7 452 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 TMEM190Q8WZ59 177 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 SMKR1H3BMG3 65 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 J3QLI3 93 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 VWC2Q2TAL6 325 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 C10orf105Q8TEF2 133 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 C17orf77Q96MU5 243 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 C2orf88Q9BSF0 95 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 FASNP49327 2511 aaKnown RBP10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 HOXA3O43365 443 aaPredicted RBP10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 SNCGO76070 127 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 NDUFA3O95167 84 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 KMT2EQ8IZD2 1858 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGHV7-81A0A0B4J1V7 117 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 C8orf86Q6ZUL3 223 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 ERASQ7Z444 233 aa10.33□□□□□ -0.76
PCDHGB1-201ENST00000523390 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 E7EUB6 86 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 DAZAP2Q15038 168 aaPredicted RBP10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 TTC9CQ8N5M4 171 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 C19orf84I3L1E1 186 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 RPL35AP18077 110 aaKnown RBP10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 BLCAPP62952 87 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 LOC107984156A0A0G2JMH3 177 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 ARL17AQ8IVW1 177 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
PCDHGB1-201ENST00000523390 RASL11AQ6T310 242 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 IFI27L1Q96BM0 104 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 CGB3P0DN86 165 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 CGB7P0DN87 165 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 TMEM213A2RRL7 107 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGKV1-17P01599 117 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 HLA-DMBP28068 263 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 C11orf52Q96A22 123 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 PRORYQ9H606 182 aa10.31□□□□□ -0.76
PCDHGB1-201ENST00000523390 TMEM238LA0A1B0GVL6 79 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 A6NJY4 79 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 K7EIM0 57 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 NDUFA4O00483 81 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 MORN5Q5VZ52 161 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 TMEM75Q8N9X5 138 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 CHCHD1Q96BP2 118 aaKnown RBP10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 TMEM14CQ9P0S9 112 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 KIAA1549Q9HCM3 1950 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 DEFB113Q30KQ7 82 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 C1orf194Q5T5A4 169 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 PRR25Q96S07 402 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 EPG5Q9HCE0 2579 aa10.3□□□□□ -0.76
PCDHGB1-201ENST00000523390 SPINK13Q1W4C9 94 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 GTSCR1Q86UQ5 136 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 V9GYV3 84 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 TRGV4A0A0C4DH28 118 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 BRWD1-AS2P59051 145 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 ZNF492Q9P255 531 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 Q8N9W7 124 aa10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 POLR3KQ9Y2Y1 108 aaPredicted RBP10.29□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGKV1OR2-108A0A075B7D4 117 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 A0A087WWL8 130 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGLV2-23P01705 113 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 VGLL1Q99990 258 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 TRAV9-2A0A087WT02 112 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 I3L2K1 104 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 RIPPLY3P57055 190 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 SPOCK3Q9BQ16 436 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 VCX2Q9H322 139 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 TRGV1A0A0A0MS02 117 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 IFI27P40305 119 aaPredicted RBP10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 NPBQ8NG41 125 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 DPH3P1Q9H4G8 78 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 VPREB3Q9UKI3 123 aa10.28□□□□□ -0.76
PCDHGB1-201ENST00000523390 TANC2Q9HCD6 1990 aa10.27□□□□□ -0.76
PCDHGB1-201ENST00000523390 GAGE10A6NGK3 116 aa10.27□□□□□ -0.76
PCDHGB1-201ENST00000523390 C3orf79P0CE67 100 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms