RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-223ENST00000523125 C7orf71A4D174 169 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 SSNA1O43805 119 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-223ENST00000523125 OR10J4P0C629 311 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 CRISP2P16562 243 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 FAM3BP58499 235 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-223ENST00000523125 DEFA1P59665 94 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 DEFA3P59666 94 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
VEGFA-223ENST00000523125 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 ZNF503Q96F45 646 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 ATP5SQ99766 215 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 VGLL1Q99990 258 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 MRPL32Q9BYC8 188 aaKnown RBP8.64□□□□□ -1.03
VEGFA-223ENST00000523125 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 FUT9Q9Y231 359 aa8.64□□□□□ -1.03
VEGFA-223ENST00000523125 MUC4Q99102 2169 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 GAGE12BA1L429 117 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 SNURFLB1AK76 121 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 GAGE7O76087 117 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 NUDT3O95989 172 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 HOXA5P20719 270 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
VEGFA-223ENST00000523125 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 PRR9Q5T870 116 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 PHYHIPLQ96FC7 376 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 PAXXQ9BUH6 204 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 MBD2Q9UBB5 411 aa8.63□□□□□ -1.03
VEGFA-223ENST00000523125 C17orf112F2Z3M2 114 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 NMBP08949 121 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 RNASE4P34096 147 aaKnown RBP8.62□□□□□ -1.03
VEGFA-223ENST00000523125 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 Q6ZQT7 251 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 Q6ZTI0 123 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 ATG101Q9BSB4 218 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 BATF3Q9NR55 127 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
VEGFA-223ENST00000523125 TRAV26-1A0A087WT03 109 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 OR7C2O60412 319 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 GPX1P07203 203 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 PET100P0DJ07 73 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 OR5I1Q13606 314 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 TMEM78Q5T7P6 136 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 EIF4E3Q8N5X7 224 aaKnown RBP8.61□□□□□ -1.03
VEGFA-223ENST00000523125 TMPRSS5Q9H3S3 457 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 GSN-AS1Q9NRJ2 163 aa8.61□□□□□ -1.03
VEGFA-223ENST00000523125 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
VEGFA-223ENST00000523125 M6PRP20645 277 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 ZNF138P52744 262 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 RANP62826 216 aaKnown RBP8.6□□□□□ -1.03
VEGFA-223ENST00000523125 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 Q8TAT8 98 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 GNPNAT1Q96EK6 184 aaPredicted RBP8.6□□□□□ -1.03
VEGFA-223ENST00000523125 C18orf15Q96N68 181 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 ALG5Q9Y673 324 aa8.6□□□□□ -1.03
VEGFA-223ENST00000523125 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
VEGFA-223ENST00000523125 TRBV7-9A0A0J9YWB2 115 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 A0A0J9YY99 117 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 NBDYA0A0U1RRE5 68 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 H3BNG1 76 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 IFNA5P01569 189 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 CCL18P55774 89 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
VEGFA-223ENST00000523125 SSX7Q7RTT5 188 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 ZNF680Q8NEM1 530 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 Q9H3A6 140 aa8.59□□□□□ -1.03
VEGFA-223ENST00000523125 PCLOQ9Y6V0 5065 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 SPINK4O60575 86 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 TCL1AP56279 114 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 KHDC3LQ587J8 217 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
VEGFA-223ENST00000523125 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
VEGFA-223ENST00000523125 TRGV1A0A0A0MS02 117 aa8.57□□□□□ -1.04
VEGFA-223ENST00000523125 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
VEGFA-223ENST00000523125 ZNF266Q14584 549 aa8.57□□□□□ -1.04
VEGFA-223ENST00000523125 ESRGQ1W209 222 aa8.57□□□□□ -1.04
VEGFA-223ENST00000523125 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
VEGFA-223ENST00000523125 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms