RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OR51M1Q9H341 326 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 IGKV2-40A0A087WW87 121 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-209ENST00000522243 A0A0J9YY99 117 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 IGKV2D-40P01614 121 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-209ENST00000522243 OR10J4P0C629 311 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 NBEAP1P0C6P0 100 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 HOXA5P20719 270 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 CCL18P55774 89 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 SOHLH1Q5JUK2 328 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 ZNRF2Q8NHG8 242 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 MARVELD1Q9BSK0 173 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 KRTAP17-1Q9BYP8 105 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 LINC00588Q9Y4M8 146 aa14.45□□□□□ -0.1
SDCBP-209ENST00000522243 TRAV26-1A0A087WT03 109 aa14.44□□□□□ -0.1
SDCBP-209ENST00000522243 KLLNB2CW77 178 aa14.44□□□□□ -0.1
SDCBP-209ENST00000522243 RNASE4P34096 147 aaKnown RBP14.44□□□□□ -0.1
SDCBP-209ENST00000522243 FAM19A4Q96LR4 140 aa14.44□□□□□ -0.1
SDCBP-209ENST00000522243 PAXXQ9BUH6 204 aa14.44□□□□□ -0.1
SDCBP-209ENST00000522243 HECTD4Q9Y4D8 3996 aa14.44□□□□□ -0.1
SDCBP-209ENST00000522243 SSNA1O43805 119 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 Q6ZTI0 123 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 FXYD5Q96DB9 178 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 GNPNAT1Q96EK6 184 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-209ENST00000522243 VGLL1Q99990 258 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 MRPL32Q9BYC8 188 aaKnown RBP14.43□□□□□ -0.1
SDCBP-209ENST00000522243 GSN-AS1Q9NRJ2 163 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 KCNIP2Q9NS61 270 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 FUT9Q9Y231 359 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 DNAH2Q9P225 4427 aa14.43□□□□□ -0.1
SDCBP-209ENST00000522243 DNAH17Q9UFH2 4485 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 NBDYA0A0U1RRE5 68 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 C17orf112F2Z3M2 114 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 ZNF324O75467 553 aaPredicted RBP14.42□□□□□ -0.1
SDCBP-209ENST00000522243 GPX1P07203 203 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 C9orf47Q6ZRZ4 202 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 SSX7Q7RTT5 188 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 PHYHIPLQ96FC7 376 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 ATP5SQ99766 215 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 SMIM3Q9BZL3 60 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 TMPRSS5Q9H3S3 457 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 HSPB11Q9Y547 144 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 FAT2Q9NYQ8 4349 aa14.42□□□□□ -0.1
SDCBP-209ENST00000522243 OR7C2O60412 319 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 MPC2O95563 127 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 M6PRP20645 277 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 DEFA1P59665 94 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 DEFA3P59666 94 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 DAZ2Q13117 558 aaKnown RBP14.41□□□□□ -0.1
SDCBP-209ENST00000522243 TMEM78Q5T7P6 136 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 PRR9Q5T870 116 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 Q6ZQT7 251 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 EIF4E3Q8N5X7 224 aaKnown RBP14.41□□□□□ -0.1
SDCBP-209ENST00000522243 RXFP4Q8TDU9 374 aa14.41□□□□□ -0.1
SDCBP-209ENST00000522243 CRISP2P16562 243 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 FFAR4Q5NUL3 377 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 ZFAND2AQ8N6M9 145 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 C11orf72Q8NBR9 251 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 ZNF503Q96F45 646 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 ZNF492Q9P255 531 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 KLF12Q9Y4X4 402 aa14.4□□□□□ -0.1
SDCBP-209ENST00000522243 EIF3GO75821 320 aaKnown RBP eCLIP14.39□□□□□ -0.11
SDCBP-209ENST00000522243 RANP62826 216 aaKnown RBP14.39□□□□□ -0.11
SDCBP-209ENST00000522243 ZNF680Q8NEM1 530 aa14.39□□□□□ -0.11
SDCBP-209ENST00000522243 Q8TAT8 98 aa14.39□□□□□ -0.11
SDCBP-209ENST00000522243 TP53TG3Q9ULZ0 132 aa14.39□□□□□ -0.11
SDCBP-209ENST00000522243 TRGV2A0A075B6R0 118 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 TRGV1A0A0A0MS02 117 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 RGS13O14921 159 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 RPL12P30050 165 aaKnown RBP14.38□□□□□ -0.11
SDCBP-209ENST00000522243 ANXA2RQ3ZCQ2 193 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 SCGB1C1Q8TD33 95 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 LINC00467Q9BRT7 94 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 MBD2Q9UBB5 411 aa14.38□□□□□ -0.11
SDCBP-209ENST00000522243 IFNA5P01569 189 aa14.37□□□□□ -0.11
SDCBP-209ENST00000522243 PET100P0DJ07 73 aa14.37□□□□□ -0.11
SDCBP-209ENST00000522243 UBE2L3P68036 154 aaKnown RBP14.37□□□□□ -0.11
SDCBP-209ENST00000522243 TNP2Q05952 138 aa14.37□□□□□ -0.11
SDCBP-209ENST00000522243 ZNF575Q86XF7 245 aa14.37□□□□□ -0.11
SDCBP-209ENST00000522243 C6orf223Q8N319 242 aa14.37□□□□□ -0.11
SDCBP-209ENST00000522243 HERC2O95714 4834 aa14.37□□□□□ -0.11
SDCBP-209ENST00000522243 NMBP08949 121 aa14.36□□□□□ -0.11
SDCBP-209ENST00000522243 ZNF138P52744 262 aa14.36□□□□□ -0.11
SDCBP-209ENST00000522243 ESRGQ1W209 222 aa14.36□□□□□ -0.11
SDCBP-209ENST00000522243 Q9H3A6 140 aa14.36□□□□□ -0.11
SDCBP-209ENST00000522243 Q9H8V8 135 aa14.36□□□□□ -0.11
SDCBP-209ENST00000522243 WFDC1Q9HC57 220 aa14.36□□□□□ -0.11
SDCBP-209ENST00000522243 IGHV1OR15-1A0A075B7D0 117 aa14.35□□□□□ -0.11
SDCBP-209ENST00000522243 MED14OSP0DP75 135 aa14.35□□□□□ -0.11
SDCBP-209ENST00000522243 CSN1S1P47710 185 aa14.35□□□□□ -0.11
SDCBP-209ENST00000522243 TCL1AP56279 114 aa14.35□□□□□ -0.11
SDCBP-209ENST00000522243 SPINK4O60575 86 aa14.34□□□□□ -0.11
SDCBP-209ENST00000522243 KHDC3LQ587J8 217 aa14.34□□□□□ -0.11
SDCBP-209ENST00000522243 VSIG2Q96IQ7 327 aa14.34□□□□□ -0.11
SDCBP-209ENST00000522243 MRPL16Q9NX20 251 aaKnown RBP14.34□□□□□ -0.11
SDCBP-209ENST00000522243 KIAA1109Q2LD37 5005 aa14.33□□□□□ -0.11
SDCBP-209ENST00000522243 H3BNG1 76 aa14.33□□□□□ -0.12
SDCBP-209ENST00000522243 IGHV3-53P01767 116 aa14.33□□□□□ -0.12
SDCBP-209ENST00000522243 MUC21Q5SSG8 566 aa14.33□□□□□ -0.12
SDCBP-209ENST00000522243 IBA57Q5T440 356 aaKnown RBP14.33□□□□□ -0.12
SDCBP-209ENST00000522243 ARPC5LQ9BPX5 153 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms