RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PRR9Q5T870 116 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 STEAP1BQ6NZ63 245 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 PATE2Q6UY27 113 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 OR10P1Q8NGE3 313 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 DTD1Q8TEA8 209 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 RASL10AQ92737 203 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 DPH3P1Q9H4G8 78 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 C8orf4Q9NR00 106 aa5.59□□□□□ -1.51
TRAPPC9-212ENST00000521944 SCGB1D2O95969 90 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 RNASE4P34096 147 aaKnown RBP5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 ERCC8Q13216 396 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 GPR107Q5VW38 600 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 ACOT7LQ6ZUV0 252 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 BPIFCQ8NFQ6 507 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 LRRC20Q8TCA0 184 aa5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 SAT2Q96F10 170 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC9-212ENST00000521944 TEX13DA0A0J9YY54 714 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 MPDU1O75352 247 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 ATP5IP56385 69 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 PLP1P60201 277 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 RAB32Q13637 225 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 C4orf46Q504U0 113 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 SUMO4Q6EEV6 95 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 SH2D6Q7Z4S9 175 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 NHLRC2Q8NBF2 726 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 HSD17B11Q8NBQ5 300 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 OR13C8Q8NGS7 320 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 OR1S1Q8NH92 325 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 S100A16Q96FQ6 103 aaKnown RBP5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 RTBDNQ9BSG5 229 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 COPZ2Q9P299 210 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 HIGD1AQ9Y241 93 aa5.57□□□□□ -1.52
TRAPPC9-212ENST00000521944 IGHV1OR15-1A0A075B7D0 117 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 A0A087WWL8 130 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 IGHV3-16A0A0C4DH30 117 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 H3BQ15 152 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 HYPMO75409 117 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 SULT1A3P0DMM9 295 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 SULT1A4P0DMN0 295 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 GATA1P15976 413 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 CXCL2P19875 107 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 TMEM268Q5VZI3 342 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 WDR73Q6P4I2 378 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 ZFAND2AQ8N6M9 145 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 C9orf163Q8N9P6 203 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 OR4D10Q8NGI6 311 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 AGPAT4-IT1Q9H0P7 198 aa5.56□□□□□ -1.52
TRAPPC9-212ENST00000521944 CRYM-AS1A6NIL9 109 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 PHOX2AO14813 284 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 B3GALNT1O75752 331 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 OPCMLQ14982 345 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 LCN15Q6UWW0 184 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 SLC25A29Q8N8R3 303 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 MARCH1Q8TCQ1 289 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 SLC50A1Q9BRV3 221 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 KIF25-AS1Q9Y6Z4 181 aa5.55□□□□□ -1.52
TRAPPC9-212ENST00000521944 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 TRAV8-1A0A0A6YYK1 113 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 TRAV4A0A0B4J268 109 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 PRSS1P07477 247 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 PFN1P07737 140 aaKnown RBP5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 OR5G3P0C626 314 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 IGLC2P0DOY2 106 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 CRISP2P16562 243 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 UBE2NLQ5JXB2 153 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 FFAR4Q5NUL3 377 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 CYP2G1PQ6ZSU1 146 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 CCDC71LQ8N9Z2 235 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 TERB2Q8NHR7 220 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 GTSF1LQ9H1H1 148 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 NAA60Q9H7X0 242 aa5.54□□□□□ -1.52
TRAPPC9-212ENST00000521944 A0A087WYN8 130 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 M0R3E3 92 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 PITX3O75364 302 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 CD3DP04234 171 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 IL5P05113 134 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 OR4E1P0C645 316 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 LINC00869P0C866 280 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 IAPPP10997 89 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 ANXA7P20073 488 aaKnown RBP5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 S100A7P31151 101 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 CCR6P51684 374 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 SMCO1Q147U7 214 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 ATRAIDQ6UW56 229 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 LYZL2Q7Z4W2 148 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 SAMD12Q8N8I0 201 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 ZFAND1Q8TCF1 268 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 LINC00477Q96M19 166 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 CACFD1Q9UGQ2 172 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 SSR3Q9UNL2 185 aa5.53□□□□□ -1.52
TRAPPC9-212ENST00000521944 GGTLC3B5MD39 225 aa5.52□□□□□ -1.53
TRAPPC9-212ENST00000521944 GPX1P07203 203 aa5.52□□□□□ -1.53
TRAPPC9-212ENST00000521944 TGFBR1P36897 503 aa5.52□□□□□ -1.53
TRAPPC9-212ENST00000521944 PRR3P79522 188 aaKnown RBP5.52□□□□□ -1.53
TRAPPC9-212ENST00000521944 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRAPPC9-212ENST00000521944 DPPA3Q6W0C5 159 aa5.52□□□□□ -1.53
TRAPPC9-212ENST00000521944 SNX29P2Q8IUI4 249 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms