RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 IGHV1OR15-1A0A075B7D0 117 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 DUXBA0A1W2PPF3 345 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 IGLV2-11P01706 119 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 GPX1P07203 203 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 OR4E1P0C645 316 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 SSBP1Q04837 148 aaKnown RBP8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 ZNF846Q147U1 533 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 C4orf46Q504U0 113 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 OR10P1Q8NGE3 313 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 OR10G4Q8NGN3 311 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 SCGB3A2Q96PL1 93 aa8.62□□□□□ -1.03
SRGAP3-212ENST00000520860 AKAIN1P0CW23 69 aa8.61□□□□□ -1.03
SRGAP3-212ENST00000520860 SLC25A6P12236 298 aa8.61□□□□□ -1.03
SRGAP3-212ENST00000520860 ERCC8Q13216 396 aa8.61□□□□□ -1.03
SRGAP3-212ENST00000520860 OPCMLQ14982 345 aa8.61□□□□□ -1.03
SRGAP3-212ENST00000520860 SAT2Q96F10 170 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-212ENST00000520860 VCX3AQ9NNX9 186 aa8.61□□□□□ -1.03
SRGAP3-212ENST00000520860 LOC100131303A0A0U1RQF7 123 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 H3BQ15 152 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 CCNKO75909 580 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 IGLC2P0DOY2 106 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 GUK1Q16774 197 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 C9orf47Q6ZRZ4 202 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 CLVS1Q8IUQ0 354 aaPredicted RBP8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 YIPF6Q96EC8 236 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
SRGAP3-212ENST00000520860 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 K7EPK0 472 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 GOSR2O14653 212 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 COX7A2P2O60397 106 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 MRPS10P82664 201 aaKnown RBP8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 SLC38A11Q08AI6 406 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 Q8N976 141 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 MRPL53Q96EL3 112 aaKnown RBP8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 SCP2D1Q9UJQ7 156 aa8.59□□□□□ -1.03
SRGAP3-212ENST00000520860 A0A087WXM4 84 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 PFN1P07737 140 aaKnown RBP8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 CRISP2P16562 243 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 RRAS2P62070 204 aaPredicted RBP8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 NCS1P62166 190 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 Q6ZRU5 148 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 ZNF546Q86UE3 836 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 AP3S1Q92572 193 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 RASL10AQ92737 203 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 SRRQ9GZT4 340 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 NPVFQ9HCQ7 196 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 COX11Q9Y6N1 276 aa8.58□□□□□ -1.04
SRGAP3-212ENST00000520860 TRAV4A0A0B4J268 109 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 FABP12A6NFH5 140 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 M0R3E3 92 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 ZNF253O75346 499 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 NMBP08949 121 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 TOR2AQ5JU69 321 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 LELP1Q5T871 98 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 C10orf113Q5VZT2 155 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 ZFAND2AQ8N6M9 145 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 OR4C5Q8NGB2 326 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 ATP6V0E2Q8NHE4 81 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 MRPS26Q9BYN8 205 aaKnown RBP8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 MGAT4CQ9UBM8 478 aa8.57□□□□□ -1.04
SRGAP3-212ENST00000520860 VBP1P61758 197 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 PRR9Q5T870 116 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 Q6ZQT7 251 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 SMIM4Q8WVI0 70 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 SPXQ9BT56 116 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 PSENENQ9NZ42 101 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 CCDC59Q9P031 241 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 RABL2BQ9UNT1 228 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 PRELID1Q9Y255 219 aa8.56□□□□□ -1.04
SRGAP3-212ENST00000520860 FNDC10F2Z333 226 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 AGPAT2O15120 278 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 POLR2GP62487 172 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 TMEM78Q5T7P6 136 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 RMI2Q96E14 147 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 MCUBQ9NWR8 336 aa8.55□□□□□ -1.04
SRGAP3-212ENST00000520860 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
SRGAP3-212ENST00000520860 RNF222A6NCQ9 220 aa8.54□□□□□ -1.04
SRGAP3-212ENST00000520860 GAS8-AS1O95177 125 aa8.54□□□□□ -1.04
SRGAP3-212ENST00000520860 HIST1H1EP10412 219 aaKnown RBP8.54□□□□□ -1.04
SRGAP3-212ENST00000520860 VAMP1P23763 118 aa8.54□□□□□ -1.04
SRGAP3-212ENST00000520860 BATF3Q9NR55 127 aa8.54□□□□□ -1.04
SRGAP3-212ENST00000520860 GGTLC3B5MD39 225 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 METTL15P1P0C7V9 234 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 GATA1P15976 413 aaPredicted RBP8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 TMEM183BQ1AE95 376 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 TMEM128Q5BJH2 165 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 FAM122CQ6P4D5 195 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 TMEM183AQ8IXX5 376 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 RAB2BQ8WUD1 216 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 PRADC1Q9BSG0 188 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 DPH3P1Q9H4G8 78 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
SRGAP3-212ENST00000520860 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
SRGAP3-212ENST00000520860 TRBV19A0A075B6N1 114 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms