RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 KLK15Q9H2R5 256 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 LOC102724200A0A096LPH7 203 aaPredicted RBP6.47□□□□□ -1.37
HMGB4-203ENST00000519684 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 NTF3P20783 257 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 CFHR3Q02985 330 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 NRN1Q9NPD7 142 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 ASH1LQ9NR48 2969 aaKnown RBP6.47□□□□□ -1.37
HMGB4-203ENST00000519684 TRAV8-2A0A0B4J237 113 aa6.46□□□□□ -1.38
HMGB4-203ENST00000519684 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
HMGB4-203ENST00000519684 KRTDAPP60985 99 aa6.46□□□□□ -1.38
HMGB4-203ENST00000519684 SRSF2Q01130 221 aaKnown RBP6.46□□□□□ -1.38
HMGB4-203ENST00000519684 UNQ9165/PRO28630Q6UXU0 137 aa6.46□□□□□ -1.38
HMGB4-203ENST00000519684 VPREB3Q9UKI3 123 aa6.46□□□□□ -1.38
HMGB4-203ENST00000519684 USP9XQ93008 2570 aaPredicted RBP6.46□□□□□ -1.38
HMGB4-203ENST00000519684 FLNCQ14315 2725 aa6.46□□□□□ -1.38
HMGB4-203ENST00000519684 ORM1P02763 201 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 ZNF138P52744 262 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 DEFA6Q01524 100 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 PRR31Q5SQ13 230 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 LYZL1Q6UWQ5 148 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 LCNL1Q6ZST4 164 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 GATD1Q8NB37 220 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 ZNF738Q8NE65 137 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 Q96MF0 132 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 PEF1Q9UBV8 284 aaKnown RBP6.45□□□□□ -1.38
HMGB4-203ENST00000519684 TMEM89A2RUT3 159 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 M0R2Z0 102 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 SMAD7O15105 426 aaKnown RBP6.45□□□□□ -1.38
HMGB4-203ENST00000519684 FSHBP01225 129 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 DDTP30046 118 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 ZNF80P51504 273 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-203ENST00000519684 RPL11P62913 178 aaKnown RBP6.45□□□□□ -1.38
HMGB4-203ENST00000519684 FAM106AQ4KMX7 169 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 CYB5R2Q6BCY4 276 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 IL17RELQ6ZVW7 336 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 NIT1Q86X76 327 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 FAM19A2Q8N3H0 131 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 ZNF664Q8N3J9 261 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 FER1L6-AS1Q8NA97 138 aa6.45□□□□□ -1.38
HMGB4-203ENST00000519684 UBR5O95071 2799 aaPredicted RBP6.45□□□□□ -1.38
HMGB4-203ENST00000519684 COL12A1Q99715 3063 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 IGHV7-4-1A0A0J9YVY3 117 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 HIST1H1AQ02539 215 aaPredicted RBP6.44□□□□□ -1.38
HMGB4-203ENST00000519684 Q6YL49 198 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 CHCHD1Q96BP2 118 aaKnown RBP6.44□□□□□ -1.38
HMGB4-203ENST00000519684 AGPAT4-IT1Q9H0P7 198 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 DAZ1Q9NQZ3 744 aaKnown RBP6.44□□□□□ -1.38
HMGB4-203ENST00000519684 CHTOPQ9Y3Y2 248 aaKnown RBP6.44□□□□□ -1.38
HMGB4-203ENST00000519684 CD33P20138 364 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 PSMB8P28062 276 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 CTRLP40313 264 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 C9orf47Q6ZRZ4 202 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 OR10J6PQ8NGY7 276 aa6.44□□□□□ -1.38
HMGB4-203ENST00000519684 OVOL1O14753 267 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 SSTP61278 116 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 LINC01559Q495D7 138 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 PRSS57Q6UWY2 283 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 ZNF493Q6ZR52 646 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 ZNF462Q96JM2 2506 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 RHPN1-AS1Q9BWJ2 59 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 UFC1Q9Y3C8 167 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
HMGB4-203ENST00000519684 CR1P17927 2039 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 K7EMT4 169 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 RAB4AP20338 218 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 TWIST1Q15672 202 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 TEX43Q6ZNM6 134 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
HMGB4-203ENST00000519684 SPTAN1Q13813 2472 aaKnown RBP6.43□□□□□ -1.38
HMGB4-203ENST00000519684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB4-203ENST00000519684 MYO18BQ8IUG5 2567 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 TMEM213A2RRL7 107 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 FAM181BA6NEQ2 426 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-203ENST00000519684 LINC00614P0C842 121 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 IGLC6P0CF74 106 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 DMRTA1Q5VZB9 504 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 SMPXQ9UHP9 88 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 LENEPQ9Y5L5 61 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 MUC21A0A0G2JKD1 596 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 MUC21A0A140T8X8 626 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 M0QZ24 198 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 C3orf79P0CE67 100 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 FOXE3Q13461 319 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 COTL1Q14019 142 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 MUC21Q5SSG8 566 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 SAMD13Q5VXD3 122 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 FAM104BQ5XKR9 115 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 REC114Q7Z4M0 266 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 GPHB5Q86YW7 130 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 TEX29Q8N6K0 151 aa6.42□□□□□ -1.38
HMGB4-203ENST00000519684 ANKRD17O75179 2603 aaKnown RBP6.41□□□□□ -1.38
HMGB4-203ENST00000519684 IGKV3-7A0A075B6H7 116 aa6.41□□□□□ -1.38
HMGB4-203ENST00000519684 KIR2DL5BA0A0G2JN68 375 aa6.41□□□□□ -1.38
HMGB4-203ENST00000519684 KIR2DL5BA0A0G2JPC4 375 aa6.41□□□□□ -1.38
HMGB4-203ENST00000519684 SOCS3O14543 225 aa6.41□□□□□ -1.38
HMGB4-203ENST00000519684 CSN3P07498 182 aa6.41□□□□□ -1.38
HMGB4-203ENST00000519684 ELANEP08246 267 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms