RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 CPAMD8Q8IZJ3 1885 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 CACNA1GO43497 2377 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 HLA-DRB4P13762 266 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 MYCNOSP40205 109 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 C1orf159Q96HA4 380 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 HLA-DRB4X5D2U9 266 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 TRGV3P03979 118 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 FXYD2P54710 66 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 FAM106AQ4KMX7 169 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 LINC00477Q96M19 166 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 C17orf77Q96MU5 243 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 SPTBN1Q01082 2364 aaKnown RBP6.73□□□□□ -1.33
PCM1-212ENST00000519253 TNCP24821 2201 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.73□□□□□ -1.33
PCM1-212ENST00000519253 PF4V1P10720 104 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 IGFL4Q6B9Z1 124 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 AMTNQ6UX39 209 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 SPRY4Q9C004 299 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 EGR2P11161 476 aaPredicted RBP6.73□□□□□ -1.33
PCM1-212ENST00000519253 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
PCM1-212ENST00000519253 MINOS1Q5TGZ0 78 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 MINOS1-NBL1R4GNA1 71 aa6.73□□□□□ -1.33
PCM1-212ENST00000519253 MED12LQ86YW9 2145 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 LYNX1G3V0Z9 82 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 LYNX1P0DP58 116 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 C2orf66Q6UXQ4 117 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 SMIM2Q9BVW6 85 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 I3L2K1 104 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 M0R1W7 72 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 EMP1P54849 157 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 CCL21O00585 134 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 RNASE4P34096 147 aaKnown RBP6.72□□□□□ -1.33
PCM1-212ENST00000519253 SPRNQ5BIV9 151 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 E7EUB6 86 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 IGLV2-23P01705 113 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 Q6ZS92 163 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 VCYO14598 125 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 ERCC8Q13216 396 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
PCM1-212ENST00000519253 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.33
PCM1-212ENST00000519253 K7EMI3 77 aa6.71□□□□□ -1.33
PCM1-212ENST00000519253 ZNF672Q499Z4 452 aaPredicted RBP6.71□□□□□ -1.33
PCM1-212ENST00000519253 LINC01560Q8TB33 94 aa6.71□□□□□ -1.33
PCM1-212ENST00000519253 C1orf229Q6ZS94 237 aaPredicted RBP6.71□□□□□ -1.34
PCM1-212ENST00000519253 PLEKHB2Q96CS7 222 aa6.71□□□□□ -1.34
PCM1-212ENST00000519253 PRADC1Q9BSG0 188 aa6.71□□□□□ -1.34
PCM1-212ENST00000519253 KMT2EQ8IZD2 1858 aa6.71□□□□□ -1.34
PCM1-212ENST00000519253 TRAV2A0A0B4J234 112 aa6.71□□□□□ -1.34
PCM1-212ENST00000519253 C14orf178Q8N769 122 aaPredicted RBP6.71□□□□□ -1.34
PCM1-212ENST00000519253 PRTN3P24158 256 aa6.71□□□□□ -1.34
PCM1-212ENST00000519253 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
PCM1-212ENST00000519253 ATG2AQ2TAZ0 1938 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 SLC25A16P16260 332 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 PAX8Q06710 450 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 MALRD1Q5VYJ5 2156 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 K7EIM0 57 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 VMO1Q7Z5L0 202 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 WFDC2Q14508 124 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 ODF1Q14990 250 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 SH2D6Q7Z4S9 175 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
PCM1-212ENST00000519253 ATXN8Q156A1 80 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 YAE1D1Q9NRH1 226 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 TRBV7-1A0A0A6YYK4 115 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 IL17RELQ6ZVW7 336 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 ZNF48Q96MX3 618 aaPredicted RBP6.7□□□□□ -1.34
PCM1-212ENST00000519253 DKK4Q9UBT3 224 aa6.7□□□□□ -1.34
PCM1-212ENST00000519253 YLPM1P49750 1951 aaKnown RBP6.69□□□□□ -1.34
PCM1-212ENST00000519253 PLCE1Q9P212 2302 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 RBAKDNA6NC62 111 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 MSMPQ1L6U9 139 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 FAM215AQ9Y5M1 114 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 CREBBPQ92793 2442 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 RNF182Q8N6D2 247 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 A0A0G2JNJ9 132 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 HTN1P15515 57 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 EFNA4P52798 201 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 LOXL1Q08397 574 aaPredicted RBP6.69□□□□□ -1.34
PCM1-212ENST00000519253 UTF1Q5T230 341 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 FAM110DQ8TAY7 271 aaPredicted RBP6.69□□□□□ -1.34
PCM1-212ENST00000519253 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 Q9UFV3 132 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 C9JAW5 83 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 IGHV4-39P01824 125 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 CD7P09564 240 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 C1QTNF4Q9BXJ3 329 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 CTSZQ9UBR2 303 aa6.69□□□□□ -1.34
PCM1-212ENST00000519253 CEP350Q5VT06 3117 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 LCNL1Q6ZST4 164 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 TNRC6AQ8NDV7 1962 aaKnown RBP6.68□□□□□ -1.34
PCM1-212ENST00000519253 TSPAN13O95857 204 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 PMVKQ15126 192 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 IGFL3Q6UXB1 125 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 COLQQ9Y215 455 aaPredicted RBP6.68□□□□□ -1.34
PCM1-212ENST00000519253 LRP4O75096 1905 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 IGFL2Q6UWQ7 119 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 ABHD17AQ96GS6 310 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 URB1-AS1Q96HZ7 61 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms