RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MRPS14O60783 128 aaKnown RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 REG1AP05451 166 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 CGB3P0DN86 165 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 PSMB3P49720 205 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 FLI1Q01543 452 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 FADDQ13158 208 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 SNCBQ16143 134 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 ACOT6Q3I5F7 207 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 LAIR2Q6ISS4 152 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM19A3Q7Z5A8 133 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 GRPEL2Q8TAA5 225 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 RASSF5Q8WWW0 418 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR5P3Q8WZ94 311 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 AQP3Q92482 292 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 GABARAPL1Q9H0R8 117 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 TMEM14BQ9NUH8 114 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 TAS2R1Q9NYW7 299 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 MPC1Q9Y5U8 109 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 LHFPL6Q9Y693 200 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 PPP5D1E7EU14 171 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF737O75373 536 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 PFN1P07737 140 aaKnown RBP2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 LINC00032P0C843 101 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 GNG3P63215 75 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 AKIRIN2Q53H80 203 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 CLVS2Q5SYC1 327 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 Q6ZSA8 131 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF709Q8N972 641 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF680Q8NEM1 530 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 SLC35B4Q969S0 331 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 MAGOHBQ96A72 148 aaKnown RBP2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 PBOV1Q9GZY1 135 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 KCNIP2Q9NS61 270 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 COA4Q9NYJ1 87 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 NUBP2Q9Y5Y2 271 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 FUOMA2VDF0 154 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CPSF4LA6NMK7 179 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 A8MUU9 505 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 C5orf58C9J3I9 102 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 H3BUA1 57 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CHP2O43745 196 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 IL6P05231 212 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ATP6V0CP27449 155 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 S100A2P29034 98 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 RPL12P30050 165 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CDKN2CP42773 168 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CXCR4P61073 352 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 SPIN3Q5JUX0 258 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 TCF24Q7RTU0 167 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 RNF182Q8N6D2 247 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ACY3Q96HD9 319 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ABHD14BQ96IU4 210 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 MRPL57Q9BQC6 102 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR51I2Q9H344 312 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 LSM5Q9Y4Y9 91 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ICOSQ9Y6W8 199 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 IGKV3-7A0A075B6H7 116 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 TRBV24-1A0A075B6N3 115 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF729A6NN14 1252 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 NOS1APO75052 506 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 RPP14O95059 124 aaKnown RBP2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HAAOP46952 286 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST1H3AP68431 136 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 FABP5Q01469 135 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST2H3PS2Q5TEC6 136 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 SPATA31B1PQ5VZV4 182 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 EBLN2Q6P2I7 272 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 RASSF6Q6ZTQ3 369 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST2H3AQ71DI3 136 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 PFN4Q8NHR9 129 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 USMG5Q96IX5 58 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 LINC01600Q96MT4 127 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 MED28Q9H204 178 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR2D2Q9H210 308 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 FKBP14Q9NWM8 211 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF492Q9P255 531 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 ALG5Q9Y673 324 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 TMEM189A5PLL7 270 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM159BA6NKW6 160 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 H3BQ85 93 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 GGCTO75223 188 aaKnown RBP2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 ATP5G1P05496 136 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 TGFBR1P36897 503 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 OMPP47874 163 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 PPP1R1AQ13522 171 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 SPCS2Q15005 226 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 LGALSLQ3ZCW2 172 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 ACSM3Q53FZ2 586 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 SAPCD1Q5SSQ6 148 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM78BQ5VT40 261 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 Q8N814 137 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST1H2BAQ96A08 127 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF2Q9BSG1 426 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 IL20Q9NYY1 176 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 IDI2-AS1Q9NZ38 188 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 TRAV27A0A087WT01 109 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 A0A1B0GV50 99 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 ODAMA1E959 279 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms