RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 HSPB11Q9Y547 144 aa8.65□□□□□ -1.02
VEGFA-218ENST00000518689 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
VEGFA-218ENST00000518689 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-218ENST00000518689 C7orf71A4D174 169 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 SSNA1O43805 119 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-218ENST00000518689 OR10J4P0C629 311 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 CRISP2P16562 243 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 FAM3BP58499 235 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-218ENST00000518689 DEFA1P59665 94 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 DEFA3P59666 94 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
VEGFA-218ENST00000518689 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 ZNF503Q96F45 646 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 ATP5SQ99766 215 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 VGLL1Q99990 258 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 MRPL32Q9BYC8 188 aaKnown RBP8.64□□□□□ -1.03
VEGFA-218ENST00000518689 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 FUT9Q9Y231 359 aa8.64□□□□□ -1.03
VEGFA-218ENST00000518689 MUC4Q99102 2169 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 GAGE12BA1L429 117 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 SNURFLB1AK76 121 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 GAGE7O76087 117 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 NUDT3O95989 172 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 HOXA5P20719 270 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
VEGFA-218ENST00000518689 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 PRR9Q5T870 116 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 PHYHIPLQ96FC7 376 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 PAXXQ9BUH6 204 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 MBD2Q9UBB5 411 aa8.63□□□□□ -1.03
VEGFA-218ENST00000518689 C17orf112F2Z3M2 114 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 NMBP08949 121 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 RNASE4P34096 147 aaKnown RBP8.62□□□□□ -1.03
VEGFA-218ENST00000518689 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 Q6ZQT7 251 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 Q6ZTI0 123 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 ATG101Q9BSB4 218 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 BATF3Q9NR55 127 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
VEGFA-218ENST00000518689 TRAV26-1A0A087WT03 109 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 OR7C2O60412 319 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 GPX1P07203 203 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 PET100P0DJ07 73 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 OR5I1Q13606 314 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 TMEM78Q5T7P6 136 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 EIF4E3Q8N5X7 224 aaKnown RBP8.61□□□□□ -1.03
VEGFA-218ENST00000518689 TMPRSS5Q9H3S3 457 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 GSN-AS1Q9NRJ2 163 aa8.61□□□□□ -1.03
VEGFA-218ENST00000518689 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
VEGFA-218ENST00000518689 M6PRP20645 277 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 ZNF138P52744 262 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 RANP62826 216 aaKnown RBP8.6□□□□□ -1.03
VEGFA-218ENST00000518689 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 Q8TAT8 98 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 GNPNAT1Q96EK6 184 aaPredicted RBP8.6□□□□□ -1.03
VEGFA-218ENST00000518689 C18orf15Q96N68 181 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 ALG5Q9Y673 324 aa8.6□□□□□ -1.03
VEGFA-218ENST00000518689 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
VEGFA-218ENST00000518689 TRBV7-9A0A0J9YWB2 115 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 A0A0J9YY99 117 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 NBDYA0A0U1RRE5 68 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 H3BNG1 76 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 IFNA5P01569 189 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 CCL18P55774 89 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
VEGFA-218ENST00000518689 SSX7Q7RTT5 188 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 ZNF680Q8NEM1 530 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 Q9H3A6 140 aa8.59□□□□□ -1.03
VEGFA-218ENST00000518689 PCLOQ9Y6V0 5065 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 SPINK4O60575 86 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 TCL1AP56279 114 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 KHDC3LQ587J8 217 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
VEGFA-218ENST00000518689 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
VEGFA-218ENST00000518689 TRGV1A0A0A0MS02 117 aa8.57□□□□□ -1.04
VEGFA-218ENST00000518689 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
VEGFA-218ENST00000518689 ZNF266Q14584 549 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms