RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 H7C1C5 153 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 KLF7O75840 302 aaPredicted RBP0.46□□□□□ -2.34
SKP1-203ENST00000517625 IFNA14P01570 189 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 APOA2P02652 100 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 LCN6P62502 163 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 MRPS15P82914 257 aaKnown RBP0.46□□□□□ -2.34
SKP1-203ENST00000517625 C1orf134Q5TEV5 83 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 PATE2Q6UY27 113 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 OR10AC1Q8NH08 325 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 RAB37Q96AX2 223 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 MALSU1Q96EH3 234 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 PSTPIP2Q9H939 334 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 LYRM2Q9NU23 88 aaPredicted RBP0.46□□□□□ -2.34
SKP1-203ENST00000517625 MRC2Q9UBG0 1479 aa0.46□□□□□ -2.34
SKP1-203ENST00000517625 TNRC6AQ8NDV7 1962 aaKnown RBP0.45□□□□□ -2.34
SKP1-203ENST00000517625 G3V2T6 193 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 ATP5HO75947 161 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 IFNA4P05014 189 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 CD2P06729 351 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 PHBP35232 272 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 VBP1P61758 197 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 LELP1Q5T871 98 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 ARPINQ7Z6K5 226 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 NUP35Q8NFH5 326 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 DGCR14Q96DF8 476 aaKnown RBP0.45□□□□□ -2.34
SKP1-203ENST00000517625 CEP19Q96LK0 163 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 HYLS1Q96M11 299 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 OR2J1Q9GZK6 312 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 CACYBPQ9HB71 228 aaKnown RBP0.45□□□□□ -2.34
SKP1-203ENST00000517625 MED29Q9NX70 200 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 HRNRQ86YZ3 2850 aaPredicted RBP0.45□□□□□ -2.34
SKP1-203ENST00000517625 MIA2Q96PC5 1412 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 KIF1BO60333 1816 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 KIAA1549Q9HCM3 1950 aa0.45□□□□□ -2.34
SKP1-203ENST00000517625 CEP192Q8TEP8 1941 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 PLXND1Q9Y4D7 1925 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 RIIAD1A6NNX1 92 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 B4DSR2 109 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 BANF1O75531 89 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 ATG12O94817 140 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 IGLV1-51P01701 117 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 CRHP06850 196 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 OGNP20774 298 aaKnown RBP0.44□□□□□ -2.34
SKP1-203ENST00000517625 SPATA45Q537H7 98 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 IFT20Q8IY31 132 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 PPTC7Q8NI37 304 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 Q8TAT8 98 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 POP5Q969H6 163 aaKnown RBP0.44□□□□□ -2.34
SKP1-203ENST00000517625 CHCHD1Q96BP2 118 aaKnown RBP0.44□□□□□ -2.34
SKP1-203ENST00000517625 TCEAL2Q9H3H9 227 aaPredicted RBP0.44□□□□□ -2.34
SKP1-203ENST00000517625 C10orf95Q9H7T3 257 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 SSR3Q9UNL2 185 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 MCM3APO60318 1980 aa0.44□□□□□ -2.34
SKP1-203ENST00000517625 E9PCH4 1651 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 CFAP43Q8NDM7 1665 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 PTPRMP28827 1452 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 IFNA1P01562 189 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 GNG5P63218 68 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 SPINK9Q5DT21 86 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 TMED4Q7Z7H5 227 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 S100A7AQ86SG5 101 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 ATOH7Q8N100 152 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 EXOC3-AS1Q8N2X6 119 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 OR4K15Q8NH41 348 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 ZC2HC1AQ96GY0 325 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 ZNF714Q96N38 554 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 RTL8AQ9BWD3 113 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 RNF11Q9Y3C5 154 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 UHRF1BP1Q6BDS2 1440 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 OBSL1O75147 1896 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 CACNA1EQ15878 2313 aa0.43□□□□□ -2.34
SKP1-203ENST00000517625 NCAPD3P42695 1498 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 DOCK3Q8IZD9 2030 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 NWD1Q149M9 1564 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 JMJD7-PLA2G4BH0Y9G9 81 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 LYRM1O43325 122 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 TRGC2P03986 189 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 KLRD1Q13241 179 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 POU6F1Q14863 301 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 HACD4Q5VWC8 232 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 PHF5AQ7RTV0 110 aaKnown RBP0.42□□□□□ -2.34
SKP1-203ENST00000517625 LRRC18Q8N456 261 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 DEFB123Q8N688 67 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 OR13C6PQ8NH95 151 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 ZHX1-C8orf76Q96EF9 292 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 GPX7Q96SL4 187 aaPredicted RBP0.42□□□□□ -2.34
SKP1-203ENST00000517625 PBDC1Q9BVG4 233 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 MAP1LC3BQ9GZQ8 125 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 LAMTOR3Q9UHA4 124 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 STOML2Q9UJZ1 356 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 VIRMAQ69YN4 1812 aaKnown RBP0.42□□□□□ -2.34
SKP1-203ENST00000517625 EIF3AQ14152 1382 aaKnown RBP0.42□□□□□ -2.34
SKP1-203ENST00000517625 TMEM131LA2VDJ0 1609 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 SCN3AQ9NY46 2000 aa0.42□□□□□ -2.34
SKP1-203ENST00000517625 SCN10AQ9Y5Y9 1956 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 hDV103S1A0JD37 113 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 GPR31O00270 319 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 HIST1H2BKO60814 126 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 PIAS1O75925 651 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms