RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 LCN15Q6UWW0 184 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 C1orf158Q8N1D5 194 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 DCANP1Q8TF63 244 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 LSM10Q969L4 123 aaKnown RBP3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ISOC2Q96AB3 205 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 CLUHP3Q96NS8 147 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ATP6V0BQ99437 205 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 C21orf62Q9NYP8 219 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 HLA-DRB4X5D2U9 266 aa3.68□□□□□ -1.82
SCARNA21.2-201ENST00000516600 A0A096LPF7 62 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 IGHV3-21A0A0B4J1V1 117 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 C7orf77A4D0Y5 90 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 RBFOX3A6NFN3 312 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZNF727A8MUV8 499 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZNF705GA8MUZ8 300 aaPredicted RBP3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 HMGB3O15347 200 aaKnown RBP3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 KRASP01116 189 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 H2AFB1P0C5Y9 115 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 RPL35P42766 123 aaKnown RBP3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 RAB5CP51148 216 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 RAB2AP61019 212 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 BAXQ07812 192 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SLC38A11Q08AI6 406 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZNF266Q14584 549 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 PRR4Q16378 134 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 FFAR4Q5NUL3 377 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 WDR73Q6P4I2 378 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 STX12Q86Y82 276 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZNF709Q8N972 641 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 OSR1Q8TAX0 266 aaPredicted RBP3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SCGB1C1Q8TD33 95 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SFT2D1Q8WV19 159 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 HIST1H2BAQ96A08 127 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 PBDC1Q9BVG4 233 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 QTRT1Q9BXR0 403 aaKnown RBP3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 PRELID3BQ9Y3B1 194 aa3.67□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZFP92A6NM28 416 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 PMS2P5A8MQ11 134 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 CEBPZOSA8MTT3 80 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 LECT2O14960 151 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 FCGR3BO75015 233 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 CTSGP08311 255 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SLC25A6P12236 298 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 FGF7P21781 194 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 FLI1Q01543 452 aaPredicted RBP3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 CATR1Q13166 79 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 WFDC2Q14508 124 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZNF506Q5JVG8 444 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 TMEM14EPQ6UXP3 125 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 H2BFWTQ7Z2G1 175 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 VKORC1L1Q8N0U8 176 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 CYB561D1Q8N8Q1 229 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 ZBTB34Q8NCN2 500 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 TMEM167AQ8TBQ9 72 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 WDR61Q9GZS3 305 aaKnown RBP3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SLC35B3Q9H1N7 401 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 TMPRSS5Q9H3S3 457 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 Q9HAA7 133 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 SMCO4Q9NRQ5 59 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 RPRMQ9NS64 109 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 GNG13Q9P2W3 67 aa3.66□□□□□ -1.82
SCARNA21.2-201ENST00000516600 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 H3BQ15 152 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 KBTBD11O94819 623 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 PRM2P04554 102 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 TSPOP30536 169 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 DUTP33316 252 aaKnown RBP3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 AKR1D1P51857 326 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 MSMO1Q15800 293 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 C15orf54Q8N8G6 183 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 VSTM2AQ8TAG5 236 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 DTD1Q8TEA8 209 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 MAP1LC3BQ9GZQ8 125 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 SLC25A22Q9H936 323 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 HSPB7Q9UBY9 170 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 VAX2Q9UIW0 290 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 PRELID1Q9Y255 219 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
SCARNA21.2-201ENST00000516600 TGIF2-C20orf24A0A0A6YYL0 155 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 PLAC8L1A1L4L8 177 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 SMCO3A2RU48 225 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 PCP4L1A6NKN8 68 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 C1orf196B1AJZ1 125 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 FAM90A26D6RGX4 464 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 CXCL1P09341 107 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 BCL2P10415 239 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 TAGLN2P37802 199 aaKnown RBP3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 SNRPEP62304 92 aaKnown RBP3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 RAB11AP62491 216 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 HBG1P69891 147 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 HBG2P69892 147 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 PSG9Q00887 426 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 GCSAMLQ5JQS6 135 aa3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 IBA57Q5T440 356 aaKnown RBP3.64□□□□□ -1.83
SCARNA21.2-201ENST00000516600 GDF5OSQ5U4N7 250 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms