RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 FAM135BQ49AJ0 1406 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 TRAV36DV7A0A075B6V5 113 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 LOC107986453A0A1B0GWG9 222 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 DEGS1O15121 323 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 KLF7O75840 302 aaPredicted RBP0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 RPL22P35268 128 aaKnown RBP0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 FOXA3P55318 350 aaPredicted RBP0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 LSM3P62310 102 aaKnown RBP0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 OR8B8Q15620 311 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 OR8I2Q8N0Y5 310 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 OR5A2Q8NGI9 324 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 AIF1LQ9BQI0 150 aa0.74□□□□□ -2.29
RNU2-53P-201ENST00000516257 CACNA1BQ00975 2339 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 MED13Q9UHV7 2174 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 MED23Q9ULK4 1368 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 JMJD7-PLA2G4BH0Y9G9 81 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 M0QZK8 103 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 DPM2O94777 84 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 PPYP01298 95 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 GLIPR1L1Q6UWM5 242 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 CASC2Q6XLA1 102 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 LINC00299Q6ZSB3 139 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 ZCCHC23Q6ZST2 131 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 OR51A4Q8NGJ6 313 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 BRK1Q8WUW1 75 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 AMELYQ99218 206 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 BATF3Q9NR55 127 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 FKBP11Q9NYL4 201 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 JPT1Q9UK76 154 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 TNRC6AQ8NDV7 1962 aaKnown RBP0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 ALPK3Q96L96 1907 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 SIP14410 1827 aa0.73□□□□□ -2.29
RNU2-53P-201ENST00000516257 ERBINQ96RT1 1412 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 PEAK1Q9H792 1746 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 DLG5Q8TDM6 1919 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 BORCS7-ASMTA0A0B4J1R7 106 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 A0A0J9YY99 117 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 C3orf85A0A1B0GTC6 90 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 UQCRQO14949 82 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 HBDP02042 147 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 DBIP07108 87 aaKnown RBP0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 SCTP09683 121 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 CCL4P13236 92 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 ALX1Q15699 326 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 CCDC153Q494R4 210 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 CCSMST1Q4G0I0 132 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 SPATA45Q537H7 98 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 Q5XG85 94 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 CIB3Q96Q77 187 aaPredicted RBP0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 NABP2Q9BQ15 211 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 WFDC10AQ9H1F0 79 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 MPC1Q9Y5U8 109 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 COL1A1P02452 1464 aaPredicted RBP0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 E9PCH4 1651 aa0.72□□□□□ -2.29
RNU2-53P-201ENST00000516257 FER1L6Q2WGJ9 1857 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 DSPPQ9NZW4 1301 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 POLEQ07864 2286 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 PRRC2BQ5JSZ5 2229 aaKnown RBP0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 DIDO1Q9BTC0 2240 aaKnown RBP0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 NCR3O14931 201 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 TNFSF15O95150 251 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 PAEPP09466 180 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 SLC25A4P12235 298 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 SDC4P31431 198 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 ETV6P41212 452 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 GTF2A1P52655 376 aaPredicted RBP0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 DNAJB13P59910 316 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 BLCAPP62952 87 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 PSPHP78330 225 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 NEDD8Q15843 81 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 IZUMO2Q6UXV1 221 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 PTPRFP10586 1907 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 FREM3P0C091 2139 aa0.71□□□□□ -2.3
RNU2-53P-201ENST00000516257 TECTAO75443 2155 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 USP54Q70EL1 1684 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 TRAV23DV6A0A075B6W5 121 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 C9JAW5 83 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 OR2H2O95918 312 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 IGLV3-1P01715 115 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 TCRAP04437 139 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 SLC25A5P05141 298 aaKnown RBP0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 CMPK1P30085 196 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 EFNA4P52798 201 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 ASB16-AS1Q495Z4 193 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 MORN2Q502X0 79 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 HSD17B12Q53GQ0 312 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 TCTE3Q8IZS6 198 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 C5orf17Q8NAS9 161 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 AP1S3Q96PC3 154 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 CALML5Q9NZT1 146 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 HIGD1AQ9Y241 93 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 XIRP1Q702N8 1843 aaKnown RBP0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 PHRF1Q9P1Y6 1649 aaKnown RBP0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 FGD6Q6ZV73 1430 aa0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
RNU2-53P-201ENST00000516257 LOC107984156A0A0G2JMH3 177 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms