RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 C5orf58C9J3I9 102 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 I3L521 148 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 NDUFA2O43678 99 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 S1PR2O95136 353 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 CPSF4O95639 269 aaKnown RBP1.7□□□□□ -2.14
HERC4-215ENST00000515753 IFNA21P01568 189 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 PRM2P04554 102 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 LINC00032P0C843 101 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 IDO1P14902 403 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 SPI1P17947 270 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 CD24P25063 80 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 COL8A2P25067 703 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 S100A7P31151 101 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 CSN1S1P47710 185 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 SERPINB10P48595 397 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 PCBD1P61457 104 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 TAF9Q16594 264 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 RPL22L1Q6P5R6 122 aaKnown RBP1.7□□□□□ -2.14
HERC4-215ENST00000515753 STX19Q8N4C7 294 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 SMIM20Q8N5G0 67 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 RNF182Q8N6D2 247 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 SLC30A7Q8NEW0 376 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 OR5D16Q8NGK9 328 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 SMCR5Q8TEV8 140 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 RASSF5Q8WWW0 418 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 C2orf50Q96LR7 162 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 CCDC115Q96NT0 180 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 MIXL1Q9H2W2 232 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 C19orf12Q9NSK7 152 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 LYRM2Q9NU23 88 aaPredicted RBP1.7□□□□□ -2.14
HERC4-215ENST00000515753 TXNL4BQ9NX01 149 aaKnown RBP1.7□□□□□ -2.14
HERC4-215ENST00000515753 TVP23BQ9NYZ1 205 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 PRNDQ9UKY0 176 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 ABCA4P78363 2273 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 MYO7BQ6PIF6 2116 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 PDZD2O15018 2839 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 TEP1Q99973 2627 aaKnown RBP1.7□□□□□ -2.14
HERC4-215ENST00000515753 SEC16AO15027 2179 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 PRR14LQ5THK1 2151 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 SPENQ96T58 3664 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 PKDREJQ9NTG1 2253 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 CSMD2Q7Z408 3487 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 ZFHX3Q15911 3703 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 TRBV19A0A075B6N1 114 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 C19orf71A6NCJ1 209 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 TMEM235A6NFC5 223 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 C17orf98A8MV24 154 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 H3BPC8 53 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 J3QRK9 145 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 HMGN4O00479 90 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 HMGB3O15347 200 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 SYNGR2O43760 224 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 NDUFC2O95298 119 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 CDS2O95674 445 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 IGF2P01344 180 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 IFNA14P01570 189 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 LGALS1P09382 135 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 GZMBP10144 247 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 ZNF14P17017 642 aaPredicted RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 RPS4Y1P22090 263 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 ALDH3A1P30838 453 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 CD200P41217 278 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 SRP9P49458 86 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 HIST1H4AP62805 103 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 CCL8P80075 99 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 ZNF181Q2M3W8 571 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 KRTAP25-1Q3LHN0 102 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 Q6Q795 121 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 ZCCHC23Q6ZST2 131 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 RPS27LQ71UM5 84 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 LRRC28Q86X40 367 aaPredicted RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 LYPD6Q86Y78 171 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 CLECL1Q8IZS7 167 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 SIGLECL1Q8N7X8 197 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 OR8B3Q8NGG8 313 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 OR5J2Q8NH18 312 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 OR8B2Q96RD0 313 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 GPER1Q99527 375 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 ZNF2Q9BSG1 426 aaPredicted RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 HIGD2AQ9BW72 106 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 C11orf68Q9H3H3 251 aaKnown RBP1.69□□□□□ -2.14
HERC4-215ENST00000515753 TPT1P8Q9HAU6 139 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 TMEM106BQ9NUM4 274 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 IL36BQ9NZH7 164 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 R4GN34 69 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 CCDC168Q8NDH2 2452 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 HIVEP1P15822 2718 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 FBN3Q75N90 2809 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 CPAMD8Q8IZJ3 1885 aa1.69□□□□□ -2.14
HERC4-215ENST00000515753 FLNCQ14315 2725 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 POLQO75417 2590 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 TRAV38-1A0A0B4J264 116 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 TMEM269A0A1B0GVZ9 245 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 A0A1B0GWA3 101 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 LYNX1G3V0Z9 82 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 G3V2T6 193 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 H7C1C5 153 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 GPR31O00270 319 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 PIN1P1O15428 100 aa1.68□□□□□ -2.14
HERC4-215ENST00000515753 PFDN1O60925 122 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms