RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 MIR17HGQ75NE6 70 aa10.54□□□□□ -0.72
HMGCLL1-209ENST00000515546 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
HMGCLL1-209ENST00000515546 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
HMGCLL1-209ENST00000515546 HECTD4Q9Y4D8 3996 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 LYRM9A8MSI8 78 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 M0R3E3 92 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 PRM2P04554 102 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 SEC11BP0C7V7 166 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 EIF5AP63241 154 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 GFI1BQ5VTD9 330 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 FAM210BQ96KR6 192 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 FUT9Q9Y231 359 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
HMGCLL1-209ENST00000515546 AZU1P20160 251 aa10.52□□□□□ -0.73
HMGCLL1-209ENST00000515546 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
HMGCLL1-209ENST00000515546 FXYD5Q96DB9 178 aa10.52□□□□□ -0.73
HMGCLL1-209ENST00000515546 LINC01587Q99440 93 aa10.52□□□□□ -0.73
HMGCLL1-209ENST00000515546 NDUFAF3Q9BU61 184 aa10.52□□□□□ -0.73
HMGCLL1-209ENST00000515546 H7BYZ3 331 aa10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 EIF3GO75821 320 aaKnown RBP eCLIP10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 LEPP41159 167 aa10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 SERF2P84101 59 aa10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 EXOC3-AS1Q8N2X6 119 aa10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
HMGCLL1-209ENST00000515546 NBEAP1P0C6P0 100 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 M6PRP20645 277 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 DAD1P61803 113 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 ACOT6Q3I5F7 207 aaPredicted RBP10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAM74A1Q5RGS3 127 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 ALKAL2Q6UX46 152 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 ZNF493Q6ZR52 646 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 SSX7Q7RTT5 188 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 TMEM263Q8WUH6 116 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 BLNKQ8WV28 456 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 OR51M1Q9H341 326 aa10.5□□□□□ -0.73
HMGCLL1-209ENST00000515546 FHITP49789 147 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 AAMDCQ9H7C9 122 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 DNAH2Q9P225 4427 aa10.49□□□□□ -0.73
HMGCLL1-209ENST00000515546 KLLNB2CW77 178 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 OR10J4P0C629 311 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 IFITM2Q01629 132 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 ERCC8Q13216 396 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 ICAM4Q14773 271 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 AKR1C8PQ5T2L2 129 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 TEX261Q6UWH6 196 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 C9orf47Q6ZRZ4 202 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 RNF141Q8WVD5 230 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 LINC00477Q96M19 166 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
HMGCLL1-209ENST00000515546 UMAD1C9J7I0 102 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 OR7C2O60412 319 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 MBP02144 154 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 P0DMU3 169 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 HTN3P15516 51 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 CRISP2P16562 243 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 SULT1A2P50226 295 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 EIF5AL1Q6IS14 154 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-209ENST00000515546 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 NMBP08949 121 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 DEFB130BP0DP73 79 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 DEFB130AP0DP74 79 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 HTN1P15515 57 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 TAS2R45P59539 299 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 LINC00612Q8N6U2 182 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 ZNF680Q8NEM1 530 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAM213BQ8TBF2 198 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 LINC00467Q9BRT7 94 aa10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 TIMM8BQ9Y5J9 83 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-209ENST00000515546 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 C7orf71A4D174 169 aa10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 CBY3A6NI87 242 aa10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 HMGB3O15347 200 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 ZFAND2AQ8N6M9 145 aa10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 POM121L12Q8N7R1 296 aa10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 VGLL1Q99990 258 aa10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 ACTR3CQ9C0K3 210 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-209ENST00000515546 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms