RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C7orf71A4D174 169 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 H0YIZ8 118 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 IFNA5P01569 189 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 RNASE4P34096 147 aaKnown RBP9.59□□□□□ -0.87
TCOF1-215ENST00000515516 FAM122CQ6P4D5 195 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 Q6ZR54 194 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 ZNF680Q8NEM1 530 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 SCGB1C1Q8TD33 95 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 RNF141Q8WVD5 230 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 GNPNAT1Q96EK6 184 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-215ENST00000515516 ATP5SQ99766 215 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 PAXXQ9BUH6 204 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
TCOF1-215ENST00000515516 GPX1P07203 203 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 M6PRP20645 277 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 CSN1S1P47710 185 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 H2BFSP57053 126 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 FAM167A-AS1Q96KT0 104 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 FUT9Q9Y231 359 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 HECTD4Q9Y4D8 3996 aa9.58□□□□□ -0.88
TCOF1-215ENST00000515516 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 TRAV26-1A0A087WT03 109 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 OR7C2O60412 319 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 MPC2O95563 127 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 OR10J4P0C629 311 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 DAZ2Q13117 558 aaKnown RBP9.57□□□□□ -0.88
TCOF1-215ENST00000515516 C9orf47Q6ZRZ4 202 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
TCOF1-215ENST00000515516 LINC00612Q8N6U2 182 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 HSPB11Q9Y547 144 aa9.57□□□□□ -0.88
TCOF1-215ENST00000515516 IGKV2-40A0A087WW87 121 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-215ENST00000515516 A0A0J9YY99 117 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 KLLNB2CW77 178 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 RGS13O14921 159 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 IGKV2D-40P01614 121 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-215ENST00000515516 NMBP08949 121 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 RPL12P30050 165 aaKnown RBP9.56□□□□□ -0.88
TCOF1-215ENST00000515516 TAS2R45P59539 299 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 CD300CQ08708 224 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 BTN1A1Q13410 526 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 FFAR4Q5NUL3 377 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 RXFP4Q8TDU9 374 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 LINC00467Q9BRT7 94 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
TCOF1-215ENST00000515516 ZNF324O75467 553 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-215ENST00000515516 CRISP2P16562 243 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 ZNF138P52744 262 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 RANP62826 216 aaKnown RBP9.55□□□□□ -0.88
TCOF1-215ENST00000515516 UBE2L3P68036 154 aaKnown RBP9.55□□□□□ -0.88
TCOF1-215ENST00000515516 ANXA2RQ3ZCQ2 193 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 KHDC3LQ587J8 217 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 SSX7Q7RTT5 188 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 LYPD1Q8N2G4 141 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 FXYD5Q96DB9 178 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 ZNF503Q96F45 646 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 VGLL1Q99990 258 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 SMIM3Q9BZL3 60 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
TCOF1-215ENST00000515516 TRGV1A0A0A0MS02 117 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 Q6ZTI0 123 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 ARPC5LQ9BPX5 153 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 TMPRSS5Q9H3S3 457 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 BATF3Q9NR55 127 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
TCOF1-215ENST00000515516 TRBV7-9A0A0J9YWB2 115 aa9.53□□□□□ -0.88
TCOF1-215ENST00000515516 H3BNG1 76 aa9.53□□□□□ -0.88
TCOF1-215ENST00000515516 HOXA5P20719 270 aa9.53□□□□□ -0.88
TCOF1-215ENST00000515516 PHYHIPLQ96FC7 376 aa9.53□□□□□ -0.88
TCOF1-215ENST00000515516 Q9H3A6 140 aa9.53□□□□□ -0.88
TCOF1-215ENST00000515516 MBD2Q9UBB5 411 aa9.53□□□□□ -0.88
TCOF1-215ENST00000515516 IGHV1OR15-1A0A075B7D0 117 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 A0A1W2PPV4 95 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 RBAKDNA6NC62 111 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-215ENST00000515516 FAM74A1Q5RGS3 127 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 IBA57Q5T440 356 aaKnown RBP9.52□□□□□ -0.89
TCOF1-215ENST00000515516 C6orf223Q8N319 242 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 C11orf72Q8NBR9 251 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 Q9H8V8 135 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
TCOF1-215ENST00000515516 SPINK4O60575 86 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 MED14OSP0DP75 135 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 TCL1AP56279 114 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 TTC32Q5I0X7 151 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 Q8TAT8 98 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 HYLS1Q96M11 299 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 C18orf15Q96N68 181 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
TCOF1-215ENST00000515516 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
TCOF1-215ENST00000515516 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
TCOF1-215ENST00000515516 PRR9Q5T870 116 aa9.5□□□□□ -0.89
TCOF1-215ENST00000515516 TP53TG3Q9ULZ0 132 aa9.5□□□□□ -0.89
TCOF1-215ENST00000515516 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
TCOF1-215ENST00000515516 PGPA6NDG6 321 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms