RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 VGLL1Q99990 258 aa15.44■□□□□ 0.06
LSM6-207ENST00000515311 AGPAT4-IT1Q9H0P7 198 aa15.44■□□□□ 0.06
LSM6-207ENST00000515311 KIR2DL5BA0A0G2JN68 375 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 KIR2DL5BA0A0G2JPC4 375 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 IGKV3-20P01619 116 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 FRMD6-AS1P0C7T7 363 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 RPL35AP18077 110 aaKnown RBP15.43■□□□□ 0.06
LSM6-207ENST00000515311 MORN3Q6PF18 240 aaPredicted RBP15.43■□□□□ 0.06
LSM6-207ENST00000515311 KIR2DL5AQ8N109 375 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 KIR2DL5BQ8NHK3 375 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 C11orf52Q96A22 123 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 RARRES2Q99969 163 aa15.43■□□□□ 0.06
LSM6-207ENST00000515311 NDUFS6O75380 124 aaKnown RBP15.42■□□□□ 0.06
LSM6-207ENST00000515311 APOC4P55056 127 aa15.42■□□□□ 0.06
LSM6-207ENST00000515311 NUTF2P61970 127 aaKnown RBP15.42■□□□□ 0.06
LSM6-207ENST00000515311 DEFA6Q01524 100 aa15.42■□□□□ 0.06
LSM6-207ENST00000515311 ERCC8Q13216 396 aa15.42■□□□□ 0.06
LSM6-207ENST00000515311 TOR2AQ5JU69 321 aa15.42■□□□□ 0.06
LSM6-207ENST00000515311 TMEM75Q8N9X5 138 aa15.42■□□□□ 0.06
LSM6-207ENST00000515311 EIF5A2Q9GZV4 153 aaKnown RBP15.42■□□□□ 0.06
LSM6-207ENST00000515311 PPP1R14DQ9NXH3 145 aa15.42■□□□□ 0.06
LSM6-207ENST00000515311 SCO2A0A1W2PP80 73 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 CT45A10P0DMU9 189 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 ZNF138P52744 262 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 MRAPQ8TCY5 172 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 C2CD4CQ8TF44 421 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 ZNF492Q9P255 531 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 KLF12Q9Y4X4 402 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 LENEPQ9Y5L5 61 aa15.41■□□□□ 0.06
LSM6-207ENST00000515311 TRBV7-9A0A0J9YWB2 115 aa15.4■□□□□ 0.06
LSM6-207ENST00000515311 IGLV2-11P01706 119 aa15.4■□□□□ 0.06
LSM6-207ENST00000515311 DEFB121Q5J5C9 76 aa15.4■□□□□ 0.06
LSM6-207ENST00000515311 FMC1Q96HJ9 113 aa15.4■□□□□ 0.06
LSM6-207ENST00000515311 CSTL1Q9H114 145 aa15.4■□□□□ 0.06
LSM6-207ENST00000515311 TRAV8-1A0A0A6YYK1 113 aa15.39■□□□□ 0.05
LSM6-207ENST00000515311 AMBPP02760 352 aa15.39■□□□□ 0.05
LSM6-207ENST00000515311 S100A9P06702 114 aaKnown RBP15.39■□□□□ 0.05
LSM6-207ENST00000515311 TSPOP30536 169 aa15.39■□□□□ 0.05
LSM6-207ENST00000515311 FAM19A4Q96LR4 140 aa15.39■□□□□ 0.05
LSM6-207ENST00000515311 SLC35B3Q9H1N7 401 aa15.39■□□□□ 0.05
LSM6-207ENST00000515311 TMEM250H0YL14 139 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 UBE2CO00762 179 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 LEPP41159 167 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 AKR1C3P42330 323 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 FLI1Q01543 452 aaPredicted RBP15.38■□□□□ 0.05
LSM6-207ENST00000515311 Q8TAT8 98 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 LINC00479Q96M42 142 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 C1QTNF4Q9BXJ3 329 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 SMDT1Q9H4I9 107 aa15.38■□□□□ 0.05
LSM6-207ENST00000515311 TRBV6-1A0A0K0K1D8 114 aa15.37■□□□□ 0.05
LSM6-207ENST00000515311 CRISP2P16562 243 aa15.37■□□□□ 0.05
LSM6-207ENST00000515311 TMEM183BQ1AE95 376 aa15.37■□□□□ 0.05
LSM6-207ENST00000515311 MED9Q9NWA0 146 aa15.37■□□□□ 0.05
LSM6-207ENST00000515311 PSG8Q9UQ74 426 aa15.37■□□□□ 0.05
LSM6-207ENST00000515311 FBN3Q75N90 2809 aa15.37■□□□□ 0.05
LSM6-207ENST00000515311 TRAV34A0A0B4J273 112 aa15.36■□□□□ 0.05
LSM6-207ENST00000515311 CA1P00915 261 aaPredicted RBP15.36■□□□□ 0.05
LSM6-207ENST00000515311 GIG44P09565 113 aaPredicted RBP15.36■□□□□ 0.05
LSM6-207ENST00000515311 CDKN1BP46527 198 aa15.36■□□□□ 0.05
LSM6-207ENST00000515311 UBE2G1P62253 170 aa15.36■□□□□ 0.05
LSM6-207ENST00000515311 PEA15Q15121 130 aa15.36■□□□□ 0.05
LSM6-207ENST00000515311 SPINK13Q1W4C9 94 aa15.36■□□□□ 0.05
LSM6-207ENST00000515311 Q86TA4 180 aa15.36■□□□□ 0.05
LSM6-207ENST00000515311 RAB19A4D1S5 217 aa15.35■□□□□ 0.05
LSM6-207ENST00000515311 M0R2Z0 102 aa15.35■□□□□ 0.05
LSM6-207ENST00000515311 SGK494Q96LW2 274 aa15.35■□□□□ 0.05
LSM6-207ENST00000515311 NDFIP1Q9BT67 221 aa15.35■□□□□ 0.05
LSM6-207ENST00000515311 KLLNB2CW77 178 aa15.34■□□□□ 0.05
LSM6-207ENST00000515311 RPL35P42766 123 aaKnown RBP15.34■□□□□ 0.05
LSM6-207ENST00000515311 SAPCD1Q5SSQ6 148 aa15.34■□□□□ 0.05
LSM6-207ENST00000515311 PRNTQ86SH4 94 aa15.34■□□□□ 0.05
LSM6-207ENST00000515311 ZFAND2AQ8N6M9 145 aa15.34■□□□□ 0.05
LSM6-207ENST00000515311 LTAP01374 205 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 SRP19P09132 144 aaKnown RBP15.33■□□□□ 0.04
LSM6-207ENST00000515311 FXYD7P58549 80 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 TAS2R60P59551 318 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 Q6ZWC4 215 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 TVP23CQ96ET8 276 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 IGF2BP2-AS1Q96M15 143 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 DERL1Q9BUN8 251 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 TREM1Q9NP99 234 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 XCL2Q9UBD3 114 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 ZFP30Q9Y2G7 519 aa15.33■□□□□ 0.04
LSM6-207ENST00000515311 CRXO43186 299 aaPredicted RBP15.32■□□□□ 0.04
LSM6-207ENST00000515311 SRSF3P84103 164 aaKnown RBP15.32■□□□□ 0.04
LSM6-207ENST00000515311 CSNK1G2-AS1Q8NCQ2 148 aa15.32■□□□□ 0.04
LSM6-207ENST00000515311 B9D2Q9BPU9 175 aa15.32■□□□□ 0.04
LSM6-207ENST00000515311 LINC00862A6NCI5 91 aa15.31■□□□□ 0.04
LSM6-207ENST00000515311 INSP01308 110 aa15.31■□□□□ 0.04
LSM6-207ENST00000515311 GPX1P07203 203 aa15.31■□□□□ 0.04
LSM6-207ENST00000515311 GFI1BQ5VTD9 330 aa15.31■□□□□ 0.04
LSM6-207ENST00000515311 SBSPONQ8IVN8 264 aa15.31■□□□□ 0.04
LSM6-207ENST00000515311 ASCL2Q99929 193 aa15.31■□□□□ 0.04
LSM6-207ENST00000515311 TRAV12-2A0A075B6T6 113 aa15.3■□□□□ 0.04
LSM6-207ENST00000515311 C9JQL5 133 aa15.3■□□□□ 0.04
LSM6-207ENST00000515311 COX8CQ7Z4L0 72 aa15.3■□□□□ 0.04
LSM6-207ENST00000515311 C20orf144Q9BQM9 153 aa15.3■□□□□ 0.04
LSM6-207ENST00000515311 PARLQ9H300 379 aa15.3■□□□□ 0.04
LSM6-207ENST00000515311 C7orf71A4D174 169 aa15.29■□□□□ 0.04
LSM6-207ENST00000515311 KIR3DS1Q14943 382 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms