RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 HIST1H2BAQ96A08 127 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 OR5B12Q96R08 314 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 METTL26Q96S19 204 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 SMIM7Q9BQ49 75 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 CHRDL1Q9BU40 450 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 FNDC4Q9H6D8 234 aaPredicted RBP3.41□□□□□ -1.86
CLDND1-228ENST00000513873 TMEM231Q9H6L2 316 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 TUBA4BQ9H853 241 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 RPS10P5Q9NQ39 176 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 YAE1D1Q9NRH1 226 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 TMEM242Q9NWH2 141 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 TMEM14CQ9P0S9 112 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 RABAC1Q9UI14 185 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 VPREB3Q9UKI3 123 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 KLK9Q9UKQ9 250 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 PUS1Q9Y606 427 aaKnown RBP eCLIP3.41□□□□□ -1.86
CLDND1-228ENST00000513873 LY96Q9Y6Y9 160 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 MALRD1Q5VYJ5 2156 aa3.41□□□□□ -1.86
CLDND1-228ENST00000513873 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.86
CLDND1-228ENST00000513873 A0A096LNT2 108 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 TRBV9A0A0B4J1U6 114 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 HELTA6NFD8 242 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 FAM74A7A6NL05 159 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 H3BQ15 152 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 K7EIM0 57 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 OR2J3O76001 311 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 TRGV3P03979 118 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 NBEAP1P0C6P0 100 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 HIST1H1EP10412 219 aaKnown RBP3.4□□□□□ -1.87
CLDND1-228ENST00000513873 IER3P46695 156 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 GALR1P47211 349 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 CNN1P51911 297 aaKnown RBP3.4□□□□□ -1.87
CLDND1-228ENST00000513873 TPPP2P59282 170 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 TAS2R60P59551 318 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 CCL20P78556 96 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF90Q03938 601 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 BTN1A1Q13410 526 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 PDE6HQ13956 83 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 LY6EQ16553 131 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 DEFB112Q30KQ8 113 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 FAM106AQ4KMX7 169 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 KCNIP4Q6PIL6 250 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 MIR17HGQ75NE6 70 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 GTSCR1Q86UQ5 136 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 ARL6IP6Q8N6S5 226 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 CYB561D1Q8N8Q1 229 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF418Q8TF45 676 aaPredicted RBP3.4□□□□□ -1.87
CLDND1-228ENST00000513873 C17orf50Q8WW18 174 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 SMIM12Q96EX1 92 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 RARRES2Q99969 163 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 FAM103A1Q9BTL3 118 aaKnown RBP3.4□□□□□ -1.87
CLDND1-228ENST00000513873 VSIRQ9H7M9 311 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 GNB4Q9HAV0 340 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 DOK5Q9P104 306 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 SELENOKQ9Y6D0 94 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 RYR3Q15413 4870 aa3.4□□□□□ -1.87
CLDND1-228ENST00000513873 IGKV1D-37A0A075B6S9 117 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 IGKV1OR2-108A0A075B7D4 117 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 MDFIC2A0A1B0GVS7 189 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 WI2-2373I1.2A0A1W2PRP0 233 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 C7orf77A4D0Y5 90 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 OR2T8A6NH00 312 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 CLDN34H7C241 214 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 GGCTO75223 188 aaKnown RBP3.39□□□□□ -1.87
CLDND1-228ENST00000513873 IL4P05112 153 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 CSN3P07498 182 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 RPL35AP18077 110 aaKnown RBP3.39□□□□□ -1.87
CLDND1-228ENST00000513873 NPPCP23582 126 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 PAX6P26367 422 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 AKR1C3P42330 323 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 GNG4P50150 75 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 UBE2G2P60604 165 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 UBE2G1P62253 170 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF674Q2M3X9 581 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 KLF17Q5JT82 389 aaPredicted RBP3.39□□□□□ -1.87
CLDND1-228ENST00000513873 RBPMS2Q6ZRY4 209 aaKnown RBP3.39□□□□□ -1.87
CLDND1-228ENST00000513873 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 OR8I2Q8N0Y5 310 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF502Q8TBZ5 544 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 PIFOQ8TCI5 191 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 TMEM37Q8WXS4 190 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 IMMP2LQ96T52 175 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 VGLL1Q99990 258 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 HSPB9Q9BQS6 159 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 SHANK2-AS3Q9BTD1 123 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 SLC25A39Q9BZJ4 359 aaPredicted RBP3.39□□□□□ -1.87
CLDND1-228ENST00000513873 PARLQ9H300 379 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 OTORQ9NRC9 128 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 MRPL27Q9P0M9 148 aaKnown RBP3.39□□□□□ -1.87
CLDND1-228ENST00000513873 TANC2Q9HCD6 1990 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
CLDND1-228ENST00000513873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.38□□□□□ -1.87
CLDND1-228ENST00000513873 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
CLDND1-228ENST00000513873 PSMB11A5LHX3 300 aa3.38□□□□□ -1.87
CLDND1-228ENST00000513873 PGPA6NDG6 321 aa3.38□□□□□ -1.87
CLDND1-228ENST00000513873 ZNF98A6NK75 572 aa3.38□□□□□ -1.87
CLDND1-228ENST00000513873 SNURFLB1AK76 121 aa3.38□□□□□ -1.87
CLDND1-228ENST00000513873 C9JCJ5 164 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms