RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SULT1A2P50226 295 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 MORN3Q6PF18 240 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 OR10J6PQ8NGY7 276 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 MRPL53Q96EL3 112 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 VGLL1Q99990 258 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 OVOL2Q9BRP0 275 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 OTORQ9NRC9 128 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 TMEM167BQ9NRX6 74 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 IGHV3OR16-12A0A075B7B8 117 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 A8MTW9 85 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 NPIPB6E9PJ23 425 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 SLC25A5P05141 298 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 RBMY1A1P0DJD3 496 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 RBMY1CP0DJD4 496 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 CT45A10P0DMU9 189 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 ATP5G3P48201 142 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 CCL20P78556 96 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 RBMY1FQ15415 496 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 EIF5AL1Q6IS14 154 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 SUN5Q8TC36 379 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 SGK494Q96LW2 274 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 PRELID1Q9Y255 219 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 U3KQK5 164 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 DNAH7Q8WXX0 4024 aa7.14□□□□□ -1.27
TOPBP1-209ENST00000513818 TRAV8-1A0A0A6YYK1 113 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 FAM74A7A6NL05 159 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 ZNF705EA8MWA4 302 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 DIRC3C9JPN6 131 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 CRXO43186 299 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 SPRY2O43597 315 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 CSN1S1P47710 185 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 GOLT1AQ6ZVE7 132 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 Q6ZWC4 215 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 LYPD1Q8N2G4 141 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 CMTM2Q8TAZ6 248 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 PCNPQ8WW12 178 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 MBD3L1Q8WWY6 194 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 RNF183Q96D59 192 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 PPP1R14DQ9NXH3 145 aa7.13□□□□□ -1.27
TOPBP1-209ENST00000513818 DEFB4AO15263 64 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 PAGE4O60829 102 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 PRM2P04554 102 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 NHLRC4P0CG21 123 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 RAB5CP51148 216 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 ZNF674Q2M3X9 581 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 PRR9Q5T870 116 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 GFI1BQ5VTD9 330 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 C5orf17Q8NAS9 161 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 OR11H2Q8NH07 326 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 GNG13Q9P2W3 67 aa7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 DYNC2H1Q8NCM8 4307 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-209ENST00000513818 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 A0A1W2PRE2 83 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 F6UZH7 168 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 INSP01308 110 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 IFNA7P01567 189 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 TCRAP04437 139 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 BTN1A1Q13410 526 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 TMEM78Q5T7P6 136 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 CCDC28AQ8IWP9 274 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 C1orf158Q8N1D5 194 aa7.11□□□□□ -1.27
TOPBP1-209ENST00000513818 PLECQ15149 4684 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 TRAV34A0A0B4J273 112 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 TEX46H3BTG2 121 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 PEX7O00628 323 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 LEPP41159 167 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 CDKN1BP46527 198 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 ZNF138P52744 262 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 CDPF1Q6NVV7 123 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 Q6ZQT7 251 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 RXFP4Q8TDU9 374 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 IGF2BP2-AS1Q96M15 143 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 LINC00479Q96M42 142 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 RARRES2Q99969 163 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 C1QTNF4Q9BXJ3 329 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 ZNF492Q9P255 531 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 EPDR1Q9UM22 224 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 TP53TG1Q9Y2A0 90 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
TOPBP1-209ENST00000513818 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 IGHV4-28A0A0C4DH34 117 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 A0A0J9YWU9 116 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 SCO2A0A1W2PP80 73 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 HBE1P02100 147 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 BTF3P20290 206 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 ZFAND2AQ8N6M9 145 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 TVP23CQ96ET8 276 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 FAM19A4Q96LR4 140 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms