RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	KLLN	B2CW77	178 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	NBEAP1	P0C6P0	100 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	HTN1	P15515	57 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	C9orf47	Q6ZRZ4	202 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	LINC00467	Q9BRT7	94 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	OR51M1	Q9H341	326 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	FUT9	Q9Y231	359 aa		11.8	□□□□□ -0.52
MATR3-222	ENST00000513678	CRISP2	P16562	243 aa		11.79	□□□□□ -0.52
MATR3-222	ENST00000513678	RPL12	P30050	165 aa	Known RBP	11.79	□□□□□ -0.52
MATR3-222	ENST00000513678	FCN2	Q15485	313 aa		11.79	□□□□□ -0.52
MATR3-222	ENST00000513678	FXYD5	Q96DB9	178 aa		11.79	□□□□□ -0.52
MATR3-222	ENST00000513678	AGPAT4-IT1	Q9H0P7	198 aa		11.79	□□□□□ -0.52
MATR3-222	ENST00000513678	NOP10	Q9NPE3	64 aa	Known RBP	11.79	□□□□□ -0.52
MATR3-222	ENST00000513678	TRBV7-9	A0A0J9YWB2	115 aa		11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	DAZ2	Q13117	558 aa	Known RBP	11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	LYPD1	Q8N2G4	141 aa		11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	EXOC3-AS1	Q8N2X6	119 aa		11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	BLNK	Q8WV28	456 aa		11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	PAXX	Q9BUH6	204 aa		11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	MBD2	Q9UBB5	411 aa		11.78	□□□□□ -0.52
MATR3-222	ENST00000513678	RYR1	P21817	5038 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	TRAV12-3	A0A0B4J271	114 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	C7orf71	A4D174	169 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678		F5H768	121 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	ZNF324	O75467	553 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	IFNA5	P01569	189 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	ERCC8	Q13216	396 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	ICAM4	Q14773	271 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	RNF141	Q8WVD5	230 aa		11.77	□□□□□ -0.53
MATR3-222	ENST00000513678	SNURFL	B1AK76	121 aa		11.76	□□□□□ -0.53
MATR3-222	ENST00000513678	PTTG1	O95997	202 aa		11.76	□□□□□ -0.53
MATR3-222	ENST00000513678	ANXA2R	Q3ZCQ2	193 aa		11.76	□□□□□ -0.53
MATR3-222	ENST00000513678	ZNF680	Q8NEM1	530 aa		11.76	□□□□□ -0.53
MATR3-222	ENST00000513678	C18orf15	Q96N68	181 aa		11.76	□□□□□ -0.53
MATR3-222	ENST00000513678	RBAKDN	A6NC62	111 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678	FFAR4	Q5NUL3	377 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678	TMEM78	Q5T7P6	136 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678	ZFAND2A	Q8N6M9	145 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678	SCGB1C1	Q8TD33	95 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678	ZNF503	Q96F45	646 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678	ZNF492	Q9P255	531 aa		11.75	□□□□□ -0.53
MATR3-222	ENST00000513678		J3KRW8	73 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	OR7C2	O60412	319 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	OR10J4	P0C629	311 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	MED14OS	P0DP75	135 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	TAS2R45	P59539	299 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	KHDC3L	Q587J8	217 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	SOHLH1	Q5JUK2	328 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	FAM122C	Q6P4D5	195 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	C11orf72	Q8NBR9	251 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	ZNRF2	Q8NHG8	242 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	PHYHIPL	Q96FC7	376 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	ATG101	Q9BSB4	218 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	ALG5	Q9Y673	324 aa		11.74	□□□□□ -0.53
MATR3-222	ENST00000513678	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-222	ENST00000513678		H3BNG1	76 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	IGKV2D-40	P01614	121 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	ZNF138	P52744	262 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	UBE2L3	P68036	154 aa	Known RBP	11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	CD300C	Q08708	224 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	BTN1A1	Q13410	526 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	C1orf134	Q5TEV5	83 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	EIF4E3	Q8N5X7	224 aa	Known RBP	11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	VGLL1	Q99990	258 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	SMIM3	Q9BZL3	60 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	WFDC1	Q9HC57	220 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	LRP1B	Q9NZR2	4599 aa		11.73	□□□□□ -0.53
MATR3-222	ENST00000513678	NUDT3	O95989	172 aa		11.72	□□□□□ -0.53
MATR3-222	ENST00000513678	GPX1	P07203	203 aa		11.72	□□□□□ -0.53
MATR3-222	ENST00000513678	M6PR	P20645	277 aa		11.72	□□□□□ -0.53
MATR3-222	ENST00000513678	CSN1S1	P47710	185 aa		11.72	□□□□□ -0.53
MATR3-222	ENST00000513678	IBA57	Q5T440	356 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-222	ENST00000513678	ARL6IP6	Q8N6S5	226 aa		11.72	□□□□□ -0.53
MATR3-222	ENST00000513678	NBDY	A0A0U1RRE5	68 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	GAGE12B	A1L429	117 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	GAGE7	O76087	117 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	GAGE12F	P0CL80	117 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	GAGE12G	P0CL81	117 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	GAGE12I	P0CL82	117 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	RNASE4	P34096	147 aa	Known RBP	11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	RAN	P62826	216 aa	Known RBP	11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	RXFP4	Q8TDU9	374 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	TMED6	Q8WW62	240 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	ASB13	Q8WXK3	278 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678		Q9H3A6	140 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	LINC00588	Q9Y4M8	146 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	LENEP	Q9Y5L5	61 aa		11.71	□□□□□ -0.53
MATR3-222	ENST00000513678	HSPG2	P98160	4391 aa		11.71	□□□□□ -0.54
MATR3-222	ENST00000513678	HOXA5	P20719	270 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	CCL18	P55774	89 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	TCL1A	P56279	114 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	PRR9	Q5T870	116 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	PQLC2	Q6ZP29	291 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678		Q6ZTI0	123 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	AQP10	Q96PS8	301 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	GSN-AS1	Q9NRJ2	163 aa		11.7	□□□□□ -0.54
MATR3-222	ENST00000513678	TRAV26-1	A0A087WT03	109 aa		11.69	□□□□□ -0.54
MATR3-222	ENST00000513678	SPINK4	O60575	86 aa		11.69	□□□□□ -0.54
MATR3-222	ENST00000513678	ZNF266	Q14584	549 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms