RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 WT1-ASQ06250 92 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 EIF4EBP1Q13541 118 aaPredicted RBP2.61□□□□□ -1.99
HTT-210ENST00000512909 LINC00483Q53H64 154 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 SELENOHQ8IZQ5 122 aaKnown RBP2.61□□□□□ -1.99
HTT-210ENST00000512909 TOMM5Q8N4H5 51 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 ARRDC1Q8N5I2 433 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 GDPD1Q8N9F7 314 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 OR1S1Q8NH92 325 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 GPR146Q96CH1 333 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 ISOC1Q96CN7 298 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 GALNT14Q96FL9 552 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 NARS2Q96I59 477 aaKnown RBP2.61□□□□□ -1.99
HTT-210ENST00000512909 TP53RKQ96S44 253 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 PRRT1Q99946 306 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 RPP21Q9H633 154 aaKnown RBP2.61□□□□□ -1.99
HTT-210ENST00000512909 EDA2RQ9HAV5 297 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 NDUFA4L2Q9NRX3 87 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 MRPL27Q9P0M9 148 aaKnown RBP2.61□□□□□ -1.99
HTT-210ENST00000512909 RABAC1Q9UI14 185 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 PSG8Q9UQ74 426 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 IGLC7A0M8Q6 106 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 TMEM223A0PJW6 202 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 CENPXA8MT69 81 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 SMKR1H3BMG3 65 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 L7N2F9 121 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 LGALS9O00182 355 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 BRI3O95415 125 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 TSPAN13O95857 204 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 IGKV1-39P01597 117 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 IGKV1-5P01602 117 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 IGKV1D-39P04432 117 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 IFNA4P05014 189 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 CTSDP07339 412 aaPredicted RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 GPX4P36969 197 aaPredicted RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 CMC4P56277 68 aaPredicted RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 AP3S2P59780 193 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 PRCDQ00LT1 54 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 THOC7Q6I9Y2 204 aaKnown RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 UNQ9165/PRO28630Q6UXU0 137 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 OR4C16Q8NGL9 310 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 OR2K2Q8NGT1 345 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 OR1P1Q8NH06 330 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 DYNC2LI1Q8TCX1 351 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 Q8WTZ3 238 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 PPP1R14BQ96C90 147 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 ACY3Q96HD9 319 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 RTBDNQ9BSG5 229 aaPredicted RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 PBDC1Q9BVG4 233 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 ACTR3CQ9C0K3 210 aaPredicted RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 TMEM222Q9H0R3 208 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 WFDC10AQ9H1F0 79 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 NAA60Q9H7X0 242 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 RETNQ9HD89 108 aa2.6□□□□□ -1.99
HTT-210ENST00000512909 RABL2AQ9UBK7 228 aaPredicted RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 YTHDF2Q9Y5A9 579 aaKnown RBP2.6□□□□□ -1.99
HTT-210ENST00000512909 NBEAL1Q6ZS30 2694 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 TRAV30A0A087WSZ9 112 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 LOC102724200A0A096LPH7 203 aaPredicted RBP2.59□□□□□ -1.99
HTT-210ENST00000512909 ANKRD20A5PA0PJZ0 165 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 OR4C46A6NHA9 309 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 C3orf84H3BNL1 204 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 NDUFA4O00483 81 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 GSTZ1O43708 216 aaPredicted RBP2.59□□□□□ -1.99
HTT-210ENST00000512909 IFNA21P01568 189 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 CD74P04233 296 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 IL4P05112 153 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 CTSGP08311 255 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 ZNF688P0C7X2 276 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 TLX1NBP0CAT3 122 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 SULT1A3P0DMM9 295 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 SULT1A4P0DMN0 295 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 IAPPP10997 89 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 BMI1P35226 326 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 HTR2BP41595 481 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 RND2P52198 227 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 LINC00315P59091 139 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 SPCS3P61009 180 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 CACNG7P62955 275 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 SSBP1Q04837 148 aaKnown RBP2.59□□□□□ -1.99
HTT-210ENST00000512909 ZNF266Q14584 549 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 COX19Q49B96 90 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 C5orf47Q569G3 176 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 TRIQKQ629K1 86 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 TOMM20LQ6UXN7 152 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 TCF24Q7RTU0 167 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 LYZL2Q7Z4W2 148 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 APRG1Q8IVJ8 170 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 LGI3Q8N145 548 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 MUC7Q8TAX7 377 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 GLYATL2Q8WU03 294 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 SMIM4Q8WVI0 70 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 RBPMSQ93062 196 aaKnown RBP2.59□□□□□ -1.99
HTT-210ENST00000512909 BCL7BQ9BQE9 202 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 GINS3Q9BRX5 216 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 GEMIN7Q9H840 131 aaKnown RBP2.59□□□□□ -1.99
HTT-210ENST00000512909 TMEM14BQ9NUH8 114 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 GSKIPQ9P0R6 139 aa2.59□□□□□ -1.99
HTT-210ENST00000512909 SMPXQ9UHP9 88 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms