RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 DNAJC4Q9NNZ3 241 aa4.83□□□□□ -1.64
RFC1-215ENST00000512881 LSM5Q9Y4Y9 91 aaKnown RBP4.83□□□□□ -1.64
RFC1-215ENST00000512881 HSPG2P98160 4391 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 TRAV5A0A0B4J249 113 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 PLAC8L1A1L4L8 177 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 C5orf51A6NDU8 294 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 CBY3A6NI87 242 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 PRAC2D3DTV9 90 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 F5H768 121 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 H3BTX0 84 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 CST7O76096 145 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 CXCL2P19875 107 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 BTF3P20290 206 aaKnown RBP4.82□□□□□ -1.64
RFC1-215ENST00000512881 CDKN1BP46527 198 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 CAMLGP49069 296 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 CAV2P51636 162 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 RAB31Q13636 194 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 OPCMLQ14982 345 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 C10orf113Q5VZT2 155 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 LCN15Q6UWW0 184 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 C9orf47Q6ZRZ4 202 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 TMEM256Q8N2U0 113 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 C12orf45Q8N5I9 185 aaPredicted RBP4.82□□□□□ -1.64
RFC1-215ENST00000512881 C15orf53Q8NAA6 179 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 ZNF431Q8TF32 576 aaPredicted RBP4.82□□□□□ -1.64
RFC1-215ENST00000512881 SEC22CQ9BRL7 303 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 SLC50A1Q9BRV3 221 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 ZNF331Q9NQX6 463 aaPredicted RBP4.82□□□□□ -1.64
RFC1-215ENST00000512881 NDUFA13Q9P0J0 144 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
RFC1-215ENST00000512881 H3BQ15 152 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 H7BYZ3 331 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 SLC17A3O00476 420 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 ATP5G1P05496 136 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 IGLC2P0DOY2 106 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 ATP5G3P48201 142 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 FAM3BP58499 235 aaPredicted RBP4.81□□□□□ -1.64
RFC1-215ENST00000512881 MIC13Q5XKP0 118 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 ZNF493Q6ZR52 646 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 Q6ZRG5 221 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 NRARPQ7Z6K4 114 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 OR10J6PQ8NGY7 276 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 SAT2Q96F10 170 aaPredicted RBP4.81□□□□□ -1.64
RFC1-215ENST00000512881 C16orf74Q96GX8 76 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 C2orf50Q96LR7 162 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 C11orf1Q9H5F2 150 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
RFC1-215ENST00000512881 NUDT15Q9NV35 164 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 UQCC1Q9NVA1 299 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 WDR83OSQ9Y284 106 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 TIMM8BQ9Y5J9 83 aaPredicted RBP4.81□□□□□ -1.64
RFC1-215ENST00000512881 PXMP4Q9Y6I8 212 aa4.81□□□□□ -1.64
RFC1-215ENST00000512881 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 FAM240BA0A1B0GVZ2 78 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 CT45A10P0DMU9 189 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 PVALBP20472 110 aaPredicted RBP4.8□□□□□ -1.64
RFC1-215ENST00000512881 S100A11P31949 105 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 RPL29P47914 159 aaKnown RBP4.8□□□□□ -1.64
RFC1-215ENST00000512881 SULT1A1P50225 295 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 S100A10P60903 97 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 IL15RAQ13261 267 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 GUK1Q16774 197 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 VWC2Q2TAL6 325 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 SOHLH1Q5JUK2 328 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 C1orf134Q5TEV5 83 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 GFI1BQ5VTD9 330 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 OR1L4Q8NGR5 311 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 C20orf144Q9BQM9 153 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 ATG101Q9BSB4 218 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 CCDC32Q9BV29 185 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 TM2D2Q9BX73 214 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 PARD6GQ9BYG4 376 aaPredicted RBP4.8□□□□□ -1.64
RFC1-215ENST00000512881 SLC39A9Q9NUM3 307 aa4.8□□□□□ -1.64
RFC1-215ENST00000512881 IGSF23A1L1A6 192 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 LEPP41159 167 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 BAXQ07812 192 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 ATP6V1FQ16864 119 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 STX12Q86Y82 276 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 TMEM252Q8N6L7 170 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 RNASE8Q8TDE3 154 aaKnown RBP4.79□□□□□ -1.64
RFC1-215ENST00000512881 TMEM263Q8WUH6 116 aaKnown RBP4.79□□□□□ -1.64
RFC1-215ENST00000512881 PFDN5Q99471 154 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 LYRM2Q9NU23 88 aaPredicted RBP4.79□□□□□ -1.64
RFC1-215ENST00000512881 ZNF586Q9NXT0 402 aa4.79□□□□□ -1.64
RFC1-215ENST00000512881 APOBP04114 4563 aaKnown RBP4.79□□□□□ -1.64
RFC1-215ENST00000512881 TRBV19A0A075B6N1 114 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 TRAV12-3A0A0B4J271 114 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 UBE2L5PA0A1B0GUS4 154 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 J3KRW8 73 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 ZNF253O75346 499 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 HIST1H1EP10412 219 aaKnown RBP4.78□□□□□ -1.64
RFC1-215ENST00000512881 FGF7P21781 194 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 CCL18P55774 89 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 HBG1P69891 147 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 HBG2P69892 147 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 OR5I1Q13606 314 aa4.78□□□□□ -1.64
RFC1-215ENST00000512881 MZT2BQ6NZ67 158 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms