RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
COL11A1-210ENST00000512756 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
COL11A1-210ENST00000512756 SPAG8Q99932 426 aaPredicted RBP9.97□□□□□ -0.81
COL11A1-210ENST00000512756 COL6A6A6NMZ7 2263 aa9.97□□□□□ -0.81
COL11A1-210ENST00000512756 DKK1O94907 266 aa9.97□□□□□ -0.81
COL11A1-210ENST00000512756 C8orf86Q6ZUL3 223 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 WIPF3A6NGB9 483 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 I3L3M4 83 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 PRR20EP86478 221 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 PRR20CP86479 221 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 PRR20DP86480 221 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 PRR20BP86481 221 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 PRR20AP86496 221 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 KAAG1Q9UBP8 84 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 ZNF134P52741 427 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 ZNF114Q8NC26 417 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 RNF114Q9Y508 228 aa9.96□□□□□ -0.81
COL11A1-210ENST00000512756 DIDO1Q9BTC0 2240 aaKnown RBP9.96□□□□□ -0.82
COL11A1-210ENST00000512756 ZNF407Q9C0G0 2248 aa9.96□□□□□ -0.82
COL11A1-210ENST00000512756 C9JAW5 83 aa9.96□□□□□ -0.82
COL11A1-210ENST00000512756 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
COL11A1-210ENST00000512756 IGLC1P0CG04 106 aa9.96□□□□□ -0.82
COL11A1-210ENST00000512756 COX8AP10176 69 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 DUX4L9Q6RFH8 374 aaPredicted RBP9.95□□□□□ -0.82
COL11A1-210ENST00000512756 C8orf31Q8N9H6 132 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 FXYD5Q96DB9 178 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 GTSF1LQ9H1H1 148 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 COL4A6Q14031 1691 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 SPTAN1Q13813 2472 aaKnown RBP9.95□□□□□ -0.82
COL11A1-210ENST00000512756 CACNA1BQ00975 2339 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 IGHV1OR15-1A0A075B7D0 117 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 CADP27708 2225 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 MYLKQ15746 1914 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 RUSC1-AS1Q66K80 236 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 G3V318 75 aa9.95□□□□□ -0.82
COL11A1-210ENST00000512756 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
COL11A1-210ENST00000512756 PRSS57Q6UWY2 283 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 CACNA1GO43497 2377 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 NLRC5Q86WI3 1866 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 SDHAF1A6NFY7 115 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 OR11H6Q8NGC7 330 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 PLXNA2O75051 1894 aa9.94□□□□□ -0.82
COL11A1-210ENST00000512756 LINC01619G3V211 115 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 SPINK13Q1W4C9 94 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 PYGO2Q9BRQ0 406 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 SIGLEC8Q9NYZ4 499 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 CACNA1HO95180 2353 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 IGLL1P15814 213 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 SRSF2Q01130 221 aaKnown RBP9.93□□□□□ -0.82
COL11A1-210ENST00000512756 VWC2Q2TAL6 325 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 YLPM1P49750 1951 aaKnown RBP9.93□□□□□ -0.82
COL11A1-210ENST00000512756 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
COL11A1-210ENST00000512756 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 DOCK11Q5JSL3 2073 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 USF3Q68DE3 2245 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 TAL2Q16559 108 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 ZC2HC1AQ96GY0 325 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
COL11A1-210ENST00000512756 CREBBPQ92793 2442 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 CDKN1BP46527 198 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 ANXA2RQ3ZCQ2 193 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 PLA2G2CQ5R387 149 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 WDR81Q562E7 1941 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 INAFM2P0DMQ5 153 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 LTAP01374 205 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 FAM215AQ9Y5M1 114 aa9.92□□□□□ -0.82
COL11A1-210ENST00000512756 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 F8VRH5 84 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 WIPF2Q8TF74 440 aaPredicted RBP9.91□□□□□ -0.82
COL11A1-210ENST00000512756 VOPP1Q96AW1 172 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 ABCA4P78363 2273 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 KNCNA6PVL3 124 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 VWC2LB2RUY7 222 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 DOCK7Q96N67 2140 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 XCL2Q9UBD3 114 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 F8W1H4 67 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 J3QLI3 93 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 SIVA1O15304 175 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 NPYP01303 97 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 ZNF491Q8N8L2 437 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 NBASA2RRP1 2371 aa9.91□□□□□ -0.82
COL11A1-210ENST00000512756 F8WEM9 126 aa9.9□□□□□ -0.82
COL11A1-210ENST00000512756 C1orf122Q6ZSJ8 110 aa9.9□□□□□ -0.82
COL11A1-210ENST00000512756 GAGE2AQ6NT46 116 aa9.9□□□□□ -0.82
COL11A1-210ENST00000512756 TICRRQ7Z2Z1 1910 aa9.9□□□□□ -0.83
COL11A1-210ENST00000512756 H3BMM0 161 aa9.9□□□□□ -0.83
COL11A1-210ENST00000512756 H3BUA1 57 aa9.9□□□□□ -0.83
COL11A1-210ENST00000512756 UBE2DNLQ8IWF7 75 aa9.9□□□□□ -0.83
COL11A1-210ENST00000512756 RNF138Q8WVD3 245 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms