RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 LTAP01374 205 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 IGKV2D-40P01614 121 aaPredicted RBP6.14□□□□□ -1.43
HTT-209ENST00000512068 P01737 135 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 SNRPD3P62318 126 aaKnown RBP6.14□□□□□ -1.43
HTT-209ENST00000512068 OR5I1Q13606 314 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 KLF5Q13887 457 aaPredicted RBP6.14□□□□□ -1.43
HTT-209ENST00000512068 SAPCD1Q5SSQ6 148 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 RBPMS2Q6ZRY4 209 aaKnown RBP6.14□□□□□ -1.43
HTT-209ENST00000512068 C18orf65Q6ZTR6 163 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 TMEM183AQ8IXX5 376 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 FAM24BQ8N5W8 94 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 OR9G4Q8NGQ1 327 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 IMMP2LQ96T52 175 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 CITED2Q99967 270 aaPredicted RBP6.14□□□□□ -1.43
HTT-209ENST00000512068 OSTCQ9NRP0 149 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 MLXQ9UH92 298 aa6.14□□□□□ -1.43
HTT-209ENST00000512068 TRAV8-1A0A0A6YYK1 113 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 A0A1W2PPQ1 181 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 ZNF705FA8MVS1 300 aaPredicted RBP6.13□□□□□ -1.43
HTT-209ENST00000512068 CCL24O00175 119 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 FOLR2P14207 255 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 CBLN1P23435 193 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 FOXL1Q12952 345 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 NSUN5P1Q3KNT7 163 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 TCTEX1D4Q5JR98 221 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 IGFL4Q6B9Z1 124 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 FAM231DQ6ZW35 169 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 RNF182Q8N6D2 247 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 DUX3Q96PT4 197 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 PPP1R14DQ9NXH3 145 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 IL36BQ9NZH7 164 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 MTORP42345 2549 aa6.13□□□□□ -1.43
HTT-209ENST00000512068 XKRY2A2RUG3 117 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 RAB5AP20339 215 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 RPS10P46783 165 aaKnown RBP6.12□□□□□ -1.43
HTT-209ENST00000512068 TFPI2P48307 235 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 RAB5BP61020 215 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 ELOBQ15370 118 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 SMUG1Q53HV7 270 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 CT83Q5H943 113 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 NDUFA11Q86Y39 141 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 OR4B1Q8NGF8 309 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 WIPF2Q8TF74 440 aaPredicted RBP6.12□□□□□ -1.43
HTT-209ENST00000512068 RAX2Q96IS3 184 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 FAM210BQ96KR6 192 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 RNASE7Q9H1E1 156 aaKnown RBP6.12□□□□□ -1.43
HTT-209ENST00000512068 ZNF492Q9P255 531 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
HTT-209ENST00000512068 TRAV9-1A0A075B6T8 112 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 TGIF2-C20orf24A0A0A6YYL0 155 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 TRAV8-2A0A0B4J237 113 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 COLCA2A8K830 154 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 IGLV2-8P01709 118 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 ZNF138P52744 262 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 PROK1P58294 105 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 HIST1H1AQ02539 215 aaPredicted RBP6.11□□□□□ -1.43
HTT-209ENST00000512068 EBLN2Q6P2I7 272 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 DLX4Q92988 240 aaPredicted RBP6.11□□□□□ -1.43
HTT-209ENST00000512068 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 MS4A6AQ9H2W1 248 aa6.11□□□□□ -1.43
HTT-209ENST00000512068 RPP21Q9H633 154 aaKnown RBP6.11□□□□□ -1.43
HTT-209ENST00000512068 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
HTT-209ENST00000512068 TRBV24-1A0A075B6N3 115 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 A8MWL6 223 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 IGLV2-11P01706 119 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 PRB4P10163 310 aaPredicted RBP6.1□□□□□ -1.43
HTT-209ENST00000512068 EDN2P20800 178 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 RPS20P60866 119 aaKnown RBP6.1□□□□□ -1.43
HTT-209ENST00000512068 ERCC8Q13216 396 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 COX19Q49B96 90 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 PSMG4Q5JS54 123 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 FAM162BQ5T6X4 162 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 Q8TAT8 98 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 LINC00477Q96M19 166 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 C8orf49Q96NF6 230 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 PRR25Q96S07 402 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 VGLL1Q99990 258 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 NAT8BQ9UHF3 227 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 SELENOKQ9Y6D0 94 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 V9GYV3 84 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 MXRA5Q9NR99 2828 aa6.1□□□□□ -1.43
HTT-209ENST00000512068 AKAP9Q99996 3911 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 TRAV2A0A0B4J234 112 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 TRAV25A0A0B4J276 109 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 OR4C46A6NHA9 309 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 K7EQG2 157 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 SOCS3O14543 225 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 SAP30O75446 220 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 DUSP14O95147 198 aaKnown RBP6.09□□□□□ -1.43
HTT-209ENST00000512068 CSN3P07498 182 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 PFN1P07737 140 aaKnown RBP6.09□□□□□ -1.43
HTT-209ENST00000512068 CXCL1P09341 107 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 ZNF688P0C7X2 276 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms