RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 hADV29S1A0JD25 119 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A10PA6NDY2 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A8PA6NJQ4 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM210A6NLX4 147 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC01548A6NM66 108 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ITGB1BP1O14713 200 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SFT2D2O95562 160 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 NCR2O95944 276 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGLV2-11P01706 119 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TCRAP04437 139 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A13PP0C7W8 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A24PP0C7X0 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 APOC4P55056 127 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 HAMPP81172 84 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 DIAPH2-AS1Q14236 149 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC01551Q86U37 167 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR51G1Q8NGK1 321 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BAQ96A08 127 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPSB4Q96A44 273 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PLEKHB2Q96CS7 222 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF501Q96CX3 271 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 C2orf50Q96LR7 162 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SLC50A1Q9BRV3 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF2Q9BSG1 426 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PLA2G3Q9NZ20 509 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A20PA6NIJ5 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 G3V4G9 280 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 H3BS24 57 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 LCE2BO14633 110 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGHV3-9P01782 118 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR9G9P0C7N8 305 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF137PP52743 207 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FGF8P55075 233 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 RND3P61587 244 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 CD69Q07108 199 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PSG5Q15238 335 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ORMDL2Q53FV1 153 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PPP1R32Q7Z5V6 425 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SYS1Q8N2H4 156 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF664Q8N3J9 261 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FANCD2OSQ96PS1 177 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPXQ9BT56 116 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 KRTAP4-11Q9BYQ6 195 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 MEGF9Q9H1U4 602 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SDF2L1Q9HCN8 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMSB15BA0A087X1C1 80 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 A8MWV9 139 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 B4DSR2 109 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 EDN3P14138 238 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ADMP35318 185 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 DAD1P61803 113 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 HLA-DRB3P79483 266 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FOXL1Q12952 345 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 EFNB3Q15768 340 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 MPV17LQ2QL34 196 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 C9orf153Q5TBE3 101 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 WDR82Q6UXN9 313 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ANKRD37Q7Z713 158 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 CBLN2Q8IUK8 224 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ARL6IP6Q8N6S5 226 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 LSM10Q969L4 123 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF385AQ96PM9 386 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 RARRES2Q99969 163 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ANGPTL4Q9BY76 406 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FOXQ1Q9C009 403 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 CALYQ9NYX4 217 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMPXQ9UHP9 88 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 LSM4Q9Y4Z0 139 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 R4GN57 208 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 MYMXA0A1B0GTQ4 84 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRSS38A1L453 326 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A18PA6NE21 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A16PA6NEW6 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A9PA6NNJ1 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A5PA8MXJ8 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TEX22C9J3V5 150 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 USP17L23D6RBM5 183 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 H0YL77 283 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PYCARD-AS1I3L0S3 204 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SAP30O75446 220 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A15PP0C7V4 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM90A14PP0C7W9 464 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 DAOP14920 347 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCL3L1P16619 93 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 HERV-K104P63124 156 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 RHOGP84095 191 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 RPL18Q07020 188 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 CLEC9AQ6UXN8 241 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SLC25A48Q6ZT89 311 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 NEGR1Q7Z3B1 354 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 H1FOOQ8IZA3 346 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 DYNAPQ8N1N2 210 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 NECAP1Q8NC96 275 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR10D3Q8NH80 312 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNRF2Q8NHG8 242 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 NT5CQ8TCD5 201 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 Q96M85 177 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 SF3B5Q9BWJ5 86 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 IL17BQ9UHF5 180 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV8-4A0A0B4J246 113 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms