RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF726P1Q15940 193 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 FAM120AOSQ5T036 256 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF497Q6ZNH5 498 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 C11orf53Q8IXP5 236 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 EXOC3-AS1Q8N2X6 119 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 NT5CQ8TCD5 201 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 GATAD1Q8WUU5 269 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 TMEM158Q8WZ71 300 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 C11orf52Q96A22 123 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 NABP1Q96AH0 204 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 BORCS8Q96FH0 119 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 SHANK2-AS3Q9BTD1 123 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 RTL8AQ9BWD3 113 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 PILRAQ9UKJ1 303 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 EPDR1Q9UM22 224 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 CHD9Q3L8U1 2897 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGHV1OR21-1A0A087WYE8 117 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 HMGN4O00479 90 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CDX4O14627 284 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 NPYP01303 97 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGHG2P01859 326 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CTLA4P16410 223 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 MAGEA5P43359 124 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 DSCR4P56555 118 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 C1orf140Q5VVS0 124 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 DGAT2L6Q6ZPD8 337 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 GVQW1Q8N7I0 195 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CCL4L1Q8NHW4 92 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 TAF15Q92804 592 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 V9GYV3 84 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 OBSL1O75147 1896 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 A0A087X002 238 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGKV3D-20A0A0C4DH25 116 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 MYMXA0A1B0GTQ4 84 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 C5orf63A6NC05 138 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PGPA6NDG6 321 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 TMEM14DPA8MWL7 114 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PGLYRP1O75594 196 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 P01737 135 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 FBXW4P57775 412 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 CCL8P80075 99 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF542PQ5EBM4 170 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 LINC00643Q86TS7 51 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 DEFB119Q8N690 84 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF525Q8N782 197 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 FLVCR1-AS1Q8TAF5 88 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q96M85 177 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 FOXC2Q99958 501 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRSS27Q9BQR3 290 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q9H8V8 135 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 NXT2Q9NPJ8 142 aaKnown RBP3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 TAC3Q9UHF0 121 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 SELENOKQ9Y6D0 94 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRANK1O15050 2925 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 MYOFQ9NZM1 2061 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 C2orf16Q68DN1 1984 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 RANBP2P49792 3224 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 MED12LQ86YW9 2145 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 NUP214P35658 2090 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGHV3OR15-7A0A075B7D8 119 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRAV17A0A0B4J275 112 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGKV1-8A0A0C4DH67 115 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 EPM2AB3EWF7 344 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 H0YGG7 62 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 H3BMM0 161 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 SLC25A20O43772 301 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 GP1BBP13224 206 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 CD59P13987 128 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 FKBP2P26885 142 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 DUTP33316 252 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 PSMB2P49721 201 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2D3P61077 147 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2D2P62837 147 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 DEFB133Q30KQ1 61 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q6ZRU5 148 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 LYZL2Q7Z4W2 148 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 RPRMLQ8N4K4 120 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 POM121L12Q8N7R1 296 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2WQ96B02 151 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 MRPL53Q96EL3 112 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 ODF3Q96PU9 254 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 GPX7Q96SL4 187 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 S1PR3Q99500 378 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 EMC6Q9BV81 110 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 HES7Q9BYE0 225 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 GLIPR2Q9H4G4 154 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 SLC25A22Q9H936 323 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 DYNLRB1Q9NP97 96 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 LINC00527Q9UJ94 153 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 F11RQ9Y624 299 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 MYO16Q9Y6X6 1858 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms