RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 FAM106AQ4KMX7 169 aa13.86□□□□□ -0.19
CCHCR1-228ENST00000509552 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
CCHCR1-228ENST00000509552 MED13LQ71F56 2210 aa13.86□□□□□ -0.19
CCHCR1-228ENST00000509552 IGHV3-66A0A0C4DH42 116 aa13.86□□□□□ -0.19
CCHCR1-228ENST00000509552 METTL26Q96S19 204 aa13.86□□□□□ -0.19
CCHCR1-228ENST00000509552 CLPSL1A2RUU4 121 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 LINC01548A6NM66 108 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 PRAC2D3DTV9 90 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 RNF182Q8N6D2 247 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 OR8A1Q8NGG7 326 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 ITLN2Q8WWU7 325 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 LOXL1Q08397 574 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 ZNF738Q8NE65 137 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 COX11Q9Y6N1 276 aa13.85□□□□□ -0.19
CCHCR1-228ENST00000509552 CSMD1Q96PZ7 3565 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 A0A096LNJ9 63 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 ATP5G2Q06055 141 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 TP73-AS1Q9UF72 201 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 HIVEP3Q5T1R4 2406 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 HBDP02042 147 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 LINC01559Q495D7 138 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 MPV17L2Q567V2 206 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 CNFNQ9BYD5 112 aa13.84□□□□□ -0.19
CCHCR1-228ENST00000509552 IGHV3OR16-13A0A075B7E8 117 aa13.83□□□□□ -0.2
CCHCR1-228ENST00000509552 IGHV3-74A0A0B4J1X5 117 aa13.83□□□□□ -0.2
CCHCR1-228ENST00000509552 SMKR1H3BMG3 65 aa13.83□□□□□ -0.2
CCHCR1-228ENST00000509552 NCR2O95944 276 aa13.83□□□□□ -0.2
CCHCR1-228ENST00000509552 IL17RELQ6ZVW7 336 aa13.83□□□□□ -0.2
CCHCR1-228ENST00000509552 NUDT3O95989 172 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 NPYP01303 97 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 PPBPP02775 128 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 C12orf54Q6X4T0 127 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 ZNF575Q86XF7 245 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 MOB4Q9Y3A3 225 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
CCHCR1-228ENST00000509552 MRPL53Q96EL3 112 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 TCF21O43680 179 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 HIST1H1AQ02539 215 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 LGALS9BQ3B8N2 356 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 LGALS9CQ6DKI2 356 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 TMEM219Q86XT9 240 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 ATP6V0BQ99437 205 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 AGPAT4-IT1Q9H0P7 198 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 MAP1LC3AQ9H492 121 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 MSRB1Q9NZV6 116 aa13.81□□□□□ -0.2
CCHCR1-228ENST00000509552 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 TRAV41A0A0B4J266 112 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 C19orf84I3L1E1 186 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 COX8AP10176 69 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 HIF1ANQ9NWT6 349 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 FAM223BA6NKX1 122 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 PTTG1IPP53801 180 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 C8orf86Q6ZUL3 223 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 FAM223AQ8IWN6 122 aa13.8□□□□□ -0.2
CCHCR1-228ENST00000509552 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 PAX8Q06710 450 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 BVES-AS1Q5T3Y7 98 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 PRSS57Q6UWY2 283 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 Q6ZVH6 145 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 DPF1Q92782 380 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 RNF185Q96GF1 192 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 TRAV8-2A0A0B4J237 113 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 IGHV4-39P01824 125 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 FXYD7P58549 80 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 U3KQE9 123 aa13.79□□□□□ -0.2
CCHCR1-228ENST00000509552 IGHV3OR16-10A0A075B7F0 116 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 GNLYP22749 145 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 PSMG3-AS1Q96PY0 264 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 PRORYQ9H606 182 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 IGHV1-69DA0A0B4J2H0 117 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 PPIFP30405 207 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 CACNG7P62955 275 aa13.78□□□□□ -0.2
CCHCR1-228ENST00000509552 SPTBN4Q9H254 2564 aa13.77□□□□□ -0.2
CCHCR1-228ENST00000509552 TRGV3P03979 118 aa13.77□□□□□ -0.21
CCHCR1-228ENST00000509552 UBE2V1Q13404 147 aa13.77□□□□□ -0.21
CCHCR1-228ENST00000509552 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
CCHCR1-228ENST00000509552 NPFFR1Q9GZQ6 430 aa13.77□□□□□ -0.21
CCHCR1-228ENST00000509552 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 C9orf47Q6ZRZ4 202 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 LINC00527Q9UJ94 153 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 CACNA1BQ00975 2339 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 ASH1LQ9NR48 2969 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 CRIP2P52943 208 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 PIMREGQ9BSJ6 248 aa13.76□□□□□ -0.21
CCHCR1-228ENST00000509552 CCL25O15444 150 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 TNFRSF6BO95407 300 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 ARL3P36405 182 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 C19orf54Q5BKX5 351 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 BRD3OSQ6XYD6 125 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 DEFB125Q8N687 156 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
CCHCR1-228ENST00000509552 TRAV40A0A0B4J280 105 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 PIFOQ8TCI5 191 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms