RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ARAP1Q96P48 1450 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 A0A087WSZ3 146 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 TRBV6-7A0A0A0MS04 114 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 LOC107984156A0A0G2JMH3 177 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 A0A1B0GW64 132 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 TCRAP04437 139 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 COX7CP15954 63 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 ETV6P41212 452 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 PCBD1P61457 104 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 MORN2Q502X0 79 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 ARL17AQ8IVW1 177 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 MMGT1Q8N4V1 131 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 DEFB119Q8N690 84 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 TSTD1Q8NFU3 115 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 OR10AG1Q8NH19 301 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 LINC00052Q96N35 136 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 TMEM14CQ9P0S9 112 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 SCN3AQ9NY46 2000 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 MGAMO43451 1857 aa1.65□□□□□ -2.15
TRAPPC13-209ENST00000508304 FRMPD1Q5SYB0 1578 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 VWDEQ8N2E2 1590 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 COL5A3P25940 1745 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 PNMA8CA0A1B0GUJ8 204 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 TRBV6-4A0A1B0GX49 114 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 BBIP1A8MTZ0 92 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 GEMIN2O14893 280 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 HCRTO43612 131 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 CKS2P33552 79 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 CNBPP62633 177 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 BLCAPP62952 87 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 OR4S1Q8NGB4 309 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 PATE1Q8WXA2 126 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 MRPL57Q9BQC6 102 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 POLEQ07864 2286 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 MYLKQ15746 1914 aa1.64□□□□□ -2.15
TRAPPC13-209ENST00000508304 EDF1O60869 148 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 SULT1C4O75897 302 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 SLC25A5P05141 298 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 SLC25A4P12235 298 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 NCS1P62166 190 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 HIST1H1AQ02539 215 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 NEDD8Q15843 81 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 UNQ6190/PRO20217Q6UXQ8 127 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 CCL4L1Q8NHW4 92 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 SMIM7Q9BQ49 75 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 FAM135BQ49AJ0 1406 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 MYOFQ9NZM1 2061 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 CEP152O94986 1710 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 HEATR1Q9H583 2144 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 FER1L6Q2WGJ9 1857 aa1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 ZCCHC6Q5VYS8 1495 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-209ENST00000508304 MIR22HGQ0VDD5 57 aa1.62□□□□□ -2.15
TRAPPC13-209ENST00000508304 C3orf62Q6ZUJ4 267 aa1.62□□□□□ -2.15
TRAPPC13-209ENST00000508304 CIB3Q96Q77 187 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-209ENST00000508304 CYSTM1Q9H1C7 97 aa1.62□□□□□ -2.15
TRAPPC13-209ENST00000508304 CR1P17927 2039 aa1.62□□□□□ -2.15
TRAPPC13-209ENST00000508304 LAMB4A4D0S4 1761 aa1.62□□□□□ -2.15
TRAPPC13-209ENST00000508304 XIRP1Q702N8 1843 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 IGLV3-32A0A0A0MS00 114 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 IGHV1-24A0A0C4DH33 117 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 K7ERU9 68 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 RBP4P02753 201 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 EVI2AP22794 236 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 KDELR1P24390 212 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 SNRPD3P62318 126 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 Q5XG85 94 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 FOXI2Q6ZQN5 318 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 NABP2Q9BQ15 211 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 SLC35B3Q9H1N7 401 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 PAIP2BQ9ULR5 123 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 TNFSF18Q9UNG2 199 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 CEP192Q8TEP8 1941 aa1.61□□□□□ -2.15
TRAPPC13-209ENST00000508304 SOGA1O94964 1423 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 ZFC3H1O60293 1989 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 PPYP01298 95 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 MPC1LP0DKB6 136 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 ZNF25P17030 456 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 DNAJB13P59910 316 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 C10orf111Q8N326 155 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 VPS25Q9BRG1 176 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 MPC1Q9Y5U8 109 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 COL4A5P29400 1685 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 FREM3P0C091 2139 aa1.6□□□□□ -2.15
TRAPPC13-209ENST00000508304 OVOS2A0A0J9YW53 1432 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 OVOS2Q6IE36 1432 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 TRAV23DV6A0A075B6W5 121 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 IFITM5A6NNB3 132 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 CCL25O15444 150 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 NUPR1O60356 82 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 HLA-DRB4P13762 266 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 GDF5OSQ5U4N7 250 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 LINC00322Q6ZN03 302 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 TMEM91Q6ZNR0 172 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 CTAGE3PQ8IX95 158 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 LINC00269Q8N2A0 174 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 C5orf17Q8NAS9 161 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 OR8J3Q8NGG0 315 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 OTOSQ8NHW6 89 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 C10orf105Q8TEF2 133 aa1.59□□□□□ -2.15
TRAPPC13-209ENST00000508304 WFDC10AQ9H1F0 79 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms