RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 GKN2Q86XP6 184 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 OR8I2Q8N0Y5 310 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 OR51A4Q8NGJ6 313 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 BRK1Q8WUW1 75 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 CLEC2BQ92478 149 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 AIF1LQ9BQI0 150 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 BATF3Q9NR55 127 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 SPANXCQ9NY87 97 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 DSPPQ9NZW4 1301 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 RP1L1Q8IWN7 2480 aaPredicted RBP0.56□□□□□ -2.32
SMN2-208ENST00000508258 FHAD1B1AJZ9 1412 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 CEP152O94986 1710 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 MUC6Q6W4X9 2439 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 MED12LQ86YW9 2145 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 BORCS7-ASMTA0A0B4J1R7 106 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 A0A1B0GW64 132 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 LOC107986453A0A1B0GWG9 222 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 C5orf58C9J3I9 102 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 C9JAW5 83 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 M0QZK8 103 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 ARPC5O15511 151 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 DPM2O94777 84 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 TNFSF15O95150 251 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 DNAL4O96015 105 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 SDC4P31431 198 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 CCDC153Q494R4 210 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 MORN2Q502X0 79 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 HAGHLQ6PII5 290 aaPredicted RBP0.55□□□□□ -2.32
SMN2-208ENST00000508258 PLPP5Q8NEB5 264 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 NABP2Q9BQ15 211 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 FKBP11Q9NYL4 201 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 TMEM14CQ9P0S9 112 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 HIGD1AQ9Y241 93 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 C22orf24Q9Y442 160 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 CACNA1BQ00975 2339 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 SCN3AQ9NY46 2000 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 ARHGEF10O15013 1369 aa0.55□□□□□ -2.32
SMN2-208ENST00000508258 KDM5CP41229 1560 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 IGLV3-32A0A0A0MS00 114 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 A0A0J9YY99 117 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 TMEM189A5PLL7 270 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 JMJD7-PLA2G4BH0Y9G9 81 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 UQCRQO14949 82 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 KLF7O75840 302 aaPredicted RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 PPYP01298 95 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 HBDP02042 147 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 SLC25A5P05141 298 aaKnown RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 DBIP07108 87 aaKnown RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 SLC25A4P12235 298 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 GTF2A1P52655 376 aaPredicted RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 GLIPR1L1Q6UWM5 242 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 IZUMO2Q6UXV1 221 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 CASC2Q6XLA1 102 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 OR5AK2Q8NH90 309 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 TMEM138Q9NPI0 162 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 HSPB8Q9UJY1 196 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 TNFSF18Q9UNG2 199 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 MPC1Q9Y5U8 109 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 INTS1Q8N201 2190 aaKnown RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 SDK1Q7Z5N4 2213 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 KIAA1549LQ6ZVL6 1849 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 ARHGAP31Q2M1Z3 1444 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 FGD6Q6ZV73 1430 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 PTPRFP10586 1907 aa0.54□□□□□ -2.32
SMN2-208ENST00000508258 TNRC6AQ8NDV7 1962 aaKnown RBP0.54□□□□□ -2.32
SMN2-208ENST00000508258 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.53□□□□□ -2.32
SMN2-208ENST00000508258 A0A096LPI6 279 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 C3orf85A0A1B0GTC6 90 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 ZNF727A8MUV8 499 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 OR2H2O95918 312 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 IGLV3-1P01715 115 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 MT-ND4LP03901 98 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 TCRAP04437 139 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 BLCAPP62952 87 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 QRFPP83859 136 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 DEFB115Q30KQ5 88 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 ASB16-AS1Q495Z4 193 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 CCSMST1Q4G0I0 132 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 HSD17B12Q53GQ0 312 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 TMEM244Q5VVB8 128 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 LINC00299Q6ZSB3 139 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 SBSPONQ8IVN8 264 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 TCTE3Q8IZS6 198 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 CIB3Q96Q77 187 aaPredicted RBP0.53□□□□□ -2.32
SMN2-208ENST00000508258 AMELYQ99218 206 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 GSKIPQ9P0R6 139 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 DLG5Q8TDM6 1919 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 ARFGEF3Q5TH69 2177 aa0.53□□□□□ -2.32
SMN2-208ENST00000508258 OTOGLQ3ZCN5 2332 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 A6NN06 94 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 IFITM5A6NNB3 132 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 CD14P08571 375 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 PAEPP09466 180 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 PDE6GP18545 87 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 CMPK1P30085 196 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 DNAJB13P59910 316 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 LSM3P62310 102 aaKnown RBP0.52□□□□□ -2.33
SMN2-208ENST00000508258 PSPHP78330 225 aa0.52□□□□□ -2.33
SMN2-208ENST00000508258 NEDD8Q15843 81 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms