RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 C20orf78Q9BR46 151 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 FGF23Q9GZV9 251 aaPredicted RBP5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 IGLV3-16A0A075B6K0 115 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 PRAC2D3DTV9 90 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 NFYAP23511 347 aaPredicted RBP5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 HMGA2P52926 109 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 MIC13Q5XKP0 118 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 C7orf65Q6ZTY9 151 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 VOPP1Q96AW1 172 aa5.42□□□□□ -1.54
PDGFRA-206ENST00000508170 IGLC2P0DOY2 106 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 IGLC3P0DOY3 106 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 COX7CP15954 63 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 NPC2P61916 151 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 C18orf65Q6ZTR6 163 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 DIRC1Q969H9 104 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 HHLA3Q9XRX5 114 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 KIAA1671Q9BY89 1806 aa5.41□□□□□ -1.54
PDGFRA-206ENST00000508170 TNRC6AQ8NDV7 1962 aaKnown RBP5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 OBSL1O75147 1896 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 CXorf51AA0A1B0GTR3 108 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF705FA8MVS1 300 aaPredicted RBP5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 HLA-DQA1P01909 254 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF705BP0CI00 300 aaPredicted RBP5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 ASIPP42127 132 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 HMGN3Q15651 99 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 ADIRFQ15847 76 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 SLC25A26Q70HW3 274 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 OR5V1Q9UGF6 321 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 ZNF580Q9UK33 172 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 PKD1L2Q7Z442 2459 aa5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 KIAA0100Q14667 2235 aaKnown RBP5.4□□□□□ -1.54
PDGFRA-206ENST00000508170 A0A0J9YXY3 114 aa5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 SMIM1B2RUZ4 78 aa5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 ADCYAP1P18509 176 aa5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 SS18Q15532 418 aa5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 ZNF791Q3KP31 576 aaPredicted RBP5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 VSTM2AQ8TAG5 236 aa5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 DENND4CQ5VZ89 1909 aa5.4□□□□□ -1.55
PDGFRA-206ENST00000508170 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 TRAV1-1A0A0B4J248 108 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 IGHV3-35A0A0C4DH35 117 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 GYPAP02724 150 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 CCL5P13501 91 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 HLA-DMBP28068 263 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 MPV17L2Q567V2 206 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 RMI2Q96E14 147 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 ZNF714Q96N38 554 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 FXYD6Q9H0Q3 95 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 MYOFQ9NZM1 2061 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 LY6G6EA0A0G2JKS1 128 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 ZFP92A6NM28 416 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 HYPMO75409 117 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 TCL1BO95988 128 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 COX6A1P12074 109 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 RPS10P46783 165 aaKnown RBP5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 SPINT3P49223 89 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 LINC00597Q9H2U6 94 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 DPH3P1Q9H4G8 78 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 ST20Q9HBF5 79 aa5.39□□□□□ -1.55
PDGFRA-206ENST00000508170 PPP1R3DO95685 299 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 SMIM11AP58511 58 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 KISS1Q15726 138 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 SPATA12Q7Z6I5 190 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 OSTCQ9NRP0 149 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 PRRC2BQ5JSZ5 2229 aaKnown RBP5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 COL4A6Q14031 1691 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 LEPROTO15243 131 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 CREBL2O60519 120 aaPredicted RBP5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 IGLV2-23P01705 113 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 KLF9Q13886 244 aaPredicted RBP5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 ZNF660Q6AZW8 331 aaPredicted RBP5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 IGFL3Q6UXB1 125 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 LYPD2Q6UXB3 125 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 YPEL2Q96QA6 119 aa5.38□□□□□ -1.55
PDGFRA-206ENST00000508170 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 IGHV3-72A0A0B4J1Y9 119 aa5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 RPL18Q07020 188 aaKnown RBP5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 FAM104BQ5XKR9 115 aa5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 DPPA3Q6W0C5 159 aa5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 B9D2Q9BPU9 175 aa5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 DOCK8Q8NF50 2099 aa5.37□□□□□ -1.55
PDGFRA-206ENST00000508170 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 IGLV8-61A0A075B6I0 122 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 IGHV3OR15-7A0A075B7D8 119 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 A0A1B0GW54 56 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 H3BRM9 83 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 BMPR1BO00238 502 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 CDK5R1Q15078 307 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 ZNF322Q6U7Q0 402 aaPredicted RBP5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 Q8N7P7 452 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 CLDND2Q8NHS1 167 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 CHAC1Q9BUX1 264 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 PLA2G12AQ9BZM1 189 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 SPCS1Q9Y6A9 102 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 PLXNA2O75051 1894 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 CCDC88CQ9P219 2028 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 POLEQ07864 2286 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 HMSDA8MTL9 139 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms